Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02963 ATGGCTTCCAAAACTTGTTCCTTCCTTGCAATTTTCCTCACAATAAACCTCCTCTTTTTCTCACTTGTTTCAGCTTGTGGCTCATACTCATGCAACCCTACTCCAAAACCAACTCCAAAACCAAAGCCAAACCCAAATCCTAACCCTACCCCTACCCCTTCAACTGGAACATGTCCACGTGATGCACTTAAACTTGGTGTCTGTGCCAATGTCCTAAAAGGATTATTGGATCTAACATTAGGCCAGCCACCGGTGAAACCATGTTGCTCCCTCCTTGATGGCCTTGTTGATCTTGAGGCTGCAGCGTGTCTTTGCACTGCCCTTAAAGCTAAAGTTTTGGGCATTCATCTTAACCTACCCATCTCACTCACCTTGCTTCTCAATGTTTGCTCAAGGAAAGTTCCACGTGATTTCCAATGTGCCTAA 426 0.4507 MASKTCSFLAIFLTINLLFFSLVSACGSYSCNPTPKPTPKPKPNPNPNPTPTPSTGTCPRDALKLGVCANVLKGLLDLTLGQPPVKPCCSLLDGLVDLEAAACLCTALKAKVLGIHLNLPISLTLLLNVCSRKVPRDFQCA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02963 141 CDD HPS_like 55 140 IPR027923 -
Vifa4g02963 141 MobiDBLite consensus disorder prediction 34 56 - -
Vifa4g02963 141 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vifa4g02963 141 SMART aai_6 58 140 IPR016140 -
Vifa4g02963 141 Pfam Hydrophobic seed protein 57 141 IPR027923 -
Vifa4g02963 141 Gene3D - 54 141 IPR036312 -
Vifa4g02963 141 PANTHER - 8 140 - -
Vifa4g02963 141 FunFam pEARLI1-like lipid transfer protein 1 56 141 - -
Vifa4g02963 141 MobiDBLite consensus disorder prediction 34 54 - -
Vifa4g02963 141 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 60 140 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02963 Vifa-Chr4 946954387 946954812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02963 48 140 Acyl Lipid Metabolism Gene Families AT4G22490 38.710 2.86e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02963 - - gmx:100801985 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02963 4 946954387 946954812 Vifa4g02963 4 946954387 946954812 ECH