Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02957 ATGGCTTACAAGGTTGCTATAATCCTTGCTCTCAACATTCTCTTTTTCACTGCTGTTTCCTCCAACTACGTCCCATGTCCTCCACCATCCTCAGAAGATCACAAACACTCACATCCAGAAAAACCAACTTGTTCTAGAGACACAATTAAGCTTGGTGTGTGTGCTGATATATTAGGTTTGATTAATGTTGAACTTGGTAAGCCACCAAAGACACCATGCTGTTCTCTCATTGGTGGTCTTGCTAATCTTGAAGCTGCTGTCTGTCTTTGCACTGCTCTTAAAGCTAATATCTTAGGCATTAACCTTAATCTTCCCATTAATTTGAGTTTGATACTTGGTTACTGTGGAAAGGGTGTTCCAAAGGAGTTCGTTTGCGCTTAA 381 0.4068 MAYKVAIILALNILFFTAVSSNYVPCPPPSSEDHKHSHPEKPTCSRDTIKLGVCADILGLINVELGKPPKTPCCSLIGGLANLEAAVCLCTALKANILGINLNLPINLSLILGYCGKGVPKEFVCA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02957 126 Pfam Hydrophobic seed protein 43 126 IPR027923 -
Vifa4g02957 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 46 125 IPR036312 -
Vifa4g02957 126 FunFam pEARLI1-like lipid transfer protein 1 42 126 - -
Vifa4g02957 126 PANTHER - 4 125 - -
Vifa4g02957 126 SMART aai_6 44 125 IPR016140 -
Vifa4g02957 126 CDD HPS_like 42 125 IPR027923 -
Vifa4g02957 126 Gene3D - 41 126 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02957 Vifa-Chr4 944769874 944770254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02957 43 125 Acyl Lipid Metabolism Gene Families AT4G22490 32.530 6.92e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02957 - - mtr:11440205 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02957 4 944769874 944770254 Vifa4g02957 4 944769874 944770254 ECH