Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02924 ATGGTCGACCAGTCCGACGACCTCAACCAACTCCTTGACAGTGCTTTGGATGATTTCCAAACCCTCAACCTAAATTCTTCCCTTCCAAGAACCGGAGAACAAAGTAGGAACACAAAAGAGTCTCCTTCTTTACCTTCAGGGGTTCAAGGATTGGGATTAGGGTTACCTGATTTGAGAAGCAAGAGAAAAGGGAAACAGAAGGTTTCTAAAGATGCTCATGTTTCTGAGGCTCTTAATAAGTTAAGGGAGCAAACTAAAGAGGCTGTTAAGGGTCTTGGATTTGCAACCCCACCTGCTGGTGCTGATGATTTGGGTAAAGATGGTATGATGGAGGATTGGGTTAAACAGTTTGAAGAACTTGCTGGCTCTCAGGATATGGAATCTATTGTGGAGACCATGATGCAACAGCTTCTGTCCAAGGAGATACTTGCTGAACCAATGAAGGAAATCGGAGAAAGGTATCCTAAGTGGTTGGAAGATCATAAAGCCAGCTTAAGCCAAGAAGAATATGACCGGTATTCACAGCAATATGGGCTGATTCGGAATCTTAACGAAGTTTATGAAAAAGATTCGGGAAACTTCACCAAGATTGTTGAGCTCATGCAGAAAATGCAAGACTGTGGACAACCTCCAAATGATATTGTCCAGGAGCTTGCTCCGGATTTTGACTTAGCCAGTCTTGGCCAGTTATCTCCAGAAATGTCTGATGGTTCTCAGCCAAATTGTTCTATAATGTGA 738 0.4309 MVDQSDDLNQLLDSALDDFQTLNLNSSLPRTGEQSRNTKESPSLPSGVQGLGLGLPDLRSKRKGKQKVSKDAHVSEALNKLREQTKEAVKGLGFATPPAGADDLGKDGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILAEPMKEIGERYPKWLEDHKASLSQEEYDRYSQQYGLIRNLNEVYEKDSGNFTKIVELMQKMQDCGQPPNDIVQELAPDFDLASLGQLSPEMSDGSQPNCSIM 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02924 245 Gene3D Pex19, mPTS binding domain 114 227 IPR038322 -
Vifa4g02924 245 Pfam Pex19 protein family 50 245 IPR006708 GO:0005777
Vifa4g02924 245 MobiDBLite consensus disorder prediction 58 77 - -
Vifa4g02924 245 PANTHER PEROXISOMAL BIOGENESIS FACTOR 19 3 245 IPR006708 GO:0005777
Vifa4g02924 245 MobiDBLite consensus disorder prediction 19 45 - -
Vifa4g02924 245 MobiDBLite consensus disorder prediction 19 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02924 Vifa-Chr4 938374514 938376925 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02924 K13337 - gmx:100527390 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02924 4 938374514 938376925 Vifa4g02924 4 938374514 938376925 ECH