Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02819 ATGGATGGTCTCATCAATGGCTTGATCGACGTAGCTCTCGGCGGCAACAACAACGACGGCGATCAAGATAACTACGACGATCGTCAATCACGGGACGAACAGTCCAGATCCTCTTGGGCGGAGGTCGTTTCCGGAGATCAGGATTCCGATCACCGTCCTCACCCTCCGAAGCAGGAGGAGTGGCAATCCGAAGATTCTAGAATCTCCAATAGACCTCACCACTACAAGAAGGATGATGTAGAACCATGGCAAAAGGATAGTAACCGTCAAAGGCCTAATAAGGAACAGGAGTGGGAATCTGAGACCTTCAATTCTTCCAACAGACCAAACAAGTCAAATGAAGATAACAACGATGGATGGCAGACTGTGGGCAAACCTTCAAGACAGACACACAAGGTTCCAAAGGATAACTGGAACAGCTATAAACTTCCTTCTGATGAGCAACAATACTCCAATGAAGTTGAGGTTGGTGCTAGAATTGAGCCCTCAGAAGATGAACTTGCTGATCTATCAAGAGCTTGTGAAAAGCTCTGGGAATTGGATTTAAATCGTTTAGTACCTGGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAAGTTTACCAAAAGGATGATATGGCGCAGGGGAGCTTGTTTACATGGGTTAGTGACGATGTATTCCGAAAGCCTACTTATGCTCGATTTCTTTCACTCTTAGATAATTACAATCCACATCAAGGATCTAAGGAGGTTGTCACATCTGAAGAGAAACAAGAGCAAGCTTCTTTCATAGAAGAAATTAGTAGAACAGCACCGATTAAATATCTTCACAAGCTTCTTGCATCCAAAGGAATCATATCAGGGAGTTCCCAAGATTTCAAAAGATTGTTGACCAGTTTGTGGTTTGATCTTTATAACCGTTGTGGAACTTCTGGTTCCTCTTCTGCTTTTGAGCATGTTTTTGTTGGAGAAATCAAACAAAGCAGTGAAGTTTCTGGATTTCATAACTGGCTGCAGTTTTACCATGAAGAAGCAAATGGAAGAGTTGATTATCAAGGCTATATTTTTCCCCGTCGACGGGGTGAAACTCCTGACTCCGAAACCCAGCTTCTGACAATTCAATTTGAATGGAATGGTGTTCTGAAGTCTGTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTTCGCTGGTCAGGAAGATAACCACATTCAGCTTGGTCCATATGCAGTTAATATCAAGTGCTATCATTTAGGCAATCAAATTGGATCTGTTTTCCCCATTGCAGATTCATGA 1305 0.4261 MDGLINGLIDVALGGNNNDGDQDNYDDRQSRDEQSRSSWAEVVSGDQDSDHRPHPPKQEEWQSEDSRISNRPHHYKKDDVEPWQKDSNRQRPNKEQEWESETFNSSNRPNKSNEDNNDGWQTVGKPSRQTHKVPKDNWNSYKLPSDEQQYSNEVEVGARIEPSEDELADLSRACEKLWELDLNRLVPGKDYEIDCGEGKKVYQKDDMAQGSLFTWVSDDVFRKPTYARFLSLLDNYNPHQGSKEVVTSEEKQEQASFIEEISRTAPIKYLHKLLASKGIISGSSQDFKRLLTSLWFDLYNRCGTSGSSSAFEHVFVGEIKQSSEVSGFHNWLQFYHEEANGRVDYQGYIFPRRRGETPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFFAGQEDNHIQLGPYAVNIKCYHLGNQIGSVFPIADS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02819 434 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 166 434 IPR018998 GO:0004521
Vifa4g02819 434 MobiDBLite consensus disorder prediction 99 152 - -
Vifa4g02819 434 PANTHER PLACENTAL PROTEIN 11-RELATED 93 433 IPR039787 GO:0004521
Vifa4g02819 434 CDD XendoU 166 430 IPR018998 GO:0004521
Vifa4g02819 434 MobiDBLite consensus disorder prediction 45 98 - -
Vifa4g02819 434 MobiDBLite consensus disorder prediction 21 35 - -
Vifa4g02819 434 Pfam Endoribonuclease XendoU 169 430 IPR018998 GO:0004521
Vifa4g02819 434 SUPERFAMILY EndoU-like 168 432 IPR037227 -
Vifa4g02819 434 MobiDBLite consensus disorder prediction 1 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02819 K14648 - gmx:100813919 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02819 4 900827866 900831161 Vifa4g02819 4 900827866 900831161 ECH