Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02581 ATGAATGCTAGAGCACGCTCAACTCTTCACTCAATCAAATCTTCTTTCAATGATGCCAAACAGGAGAAGAAGATGGAGGTTGGAGGAAGCAAAGGAATGAAAAATGGTCGTCGATCTAATCGAGAAAAGAAGATTGCATTGCTACAAGATGTAGATAAGTTGAAGAGGAAGCTTAGACATGAAGAGAATGTTCATAGAGCTTTGGAAAGAGCATTTACAAGACCTTTGGGATCTTTGCCTCGTCTTCCTCCTTATCTTCCTCCATATACATTGGAGCTTCTTGCTGAGGTAGCAGTGTTGGAGGAAGAAGTTGTAAGGCTTGAAGAACAAGTTGTGAATTTCAGGCAAGGTTTATATCAAGAAGCTGTGTACATTTCATCTAAAAGAAATGCGGAAAATTTGAATGATTCTATTGATCAAAACCACATGAGAAATAGTAGTTCAAAGCATCAAAGATCGAAATCTTATTCGCAAAATGAGTTTAATTCAATGACAACAACAAAGGTGACACCACAGAATTCTCTTGCCAGAAGTGCTTCTAGCAGGAAGCTATTATTCTCTCCTGACAGTGTCAATAATCGCAGTGGGGGGAGTAGTAATGGGAAGCAATTGCACAGAAAACAAGATTCATTCTCATCTATCCAAGAAGAGGGAAGAGGAAAAGAGAATCTATTGTTTGGTAACTTTCTGAAAGATAAACAGTCTCCGGTGAAGAAAATATCGAAACTCATTACTCCATTAAAGAAATCTCCACATAAACATGAATCACCTCAGAAGAACTCCGTGGATCACTTCAAATTGCAGCTGGATTGGAGATTATCAGAACATGAAAGAGCTTCATCAAATTCGCCAACAAATAATAAAGTGTCAAAAGTTGATAGCACACCGAATAGAGTTTCGGAGGATCTTGTCAAGTGTTTGTCTAACATATTTGTGAGAATTAGTACATCCAAGGACAAATTTGTGGAACCAAAAACTCCTTCAACCTCTGGATCATCTTTCAACCAATACAGCAAGGAAAACGATCAGTTTTGTGATCCCTATGATATCTGCTCAGAATCCATAACAACAGAAGTTGGTCCATATAAGAGTTTATGTGAAGTTAAAGCCTCTACCGTTGATCTCAACAAAACAACAAATGCGATGTTTCTTATCCACAGATTGAAGTTTCTTCTTGGGAAACTCGCCTCGGTGAACTTGAAGGGCCTTAACCATCAAGAAAAACTTGCATTCTGGATAAACACATACAATTCATCTATTCTGAATGCATACTTAGAACATGGCATACCCGGAAGTCCTGAAATGGTTGTAGCACTAATGCAAAAGGCAACAATAGTAGTAGGGGGACAGTTGCTGAATGCAATCACAATAGAACATTTCATCTTGAGACTACCTTATCACCTTAAATTTACATGTCCAAAAGCTGCAAAAAATGATGAAGTGAAAGCAAGAAGCATATTTGGATTGGAATGGTCAGAGCCCTTAGTAACATTTGCACTTTCATGCGGAAGCTGGTCTTCACCTGCAGTGAGGGTGTATACTGCATCAGAAGTTGAAAATGAGTTAGGAGCAGCAAAAAGAGATTATTTACAAGCATCTATCGGAATCACAAAATCGAACAAGATAATAATTCCAAAGTTGTTGGATTGGTATTTACTAGATTTCGCCAAGGATCTTGATTCTTTATTGGACTGGATTTGTCTCCAATTACCAGATGAAATAAGAAACCAAGCAGTTAAATGCCTTGAAGGACAAGAAAGAGAGTCTCTTTCAAAGATGGTACAAATGAAGCCTTATGATTTTACTTTCAGGTTGCTTTTACACACCAATGAATAA 1836 0.3785 MNARARSTLHSIKSSFNDAKQEKKMEVGGSKGMKNGRRSNREKKIALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPYTLELLAEVAVLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNAENLNDSIDQNHMRNSSSKHQRSKSYSQNEFNSMTTTKVTPQNSLARSASSRKLLFSPDSVNNRSGGSSNGKQLHRKQDSFSSIQEEGRGKENLLFGNFLKDKQSPVKKISKLITPLKKSPHKHESPQKNSVDHFKLQLDWRLSEHERASSNSPTNNKVSKVDSTPNRVSEDLVKCLSNIFVRISTSKDKFVEPKTPSTSGSSFNQYSKENDQFCDPYDICSESITTEVGPYKSLCEVKASTVDLNKTTNAMFLIHRLKFLLGKLASVNLKGLNHQEKLAFWINTYNSSILNAYLEHGIPGSPEMVVALMQKATIVVGGQLLNAITIEHFILRLPYHLKFTCPKAAKNDEVKARSIFGLEWSEPLVTFALSCGSWSSPAVRVYTASEVENELGAAKRDYLQASIGITKSNKIIIPKLLDWYLLDFAKDLDSLLDWICLQLPDEIRNQAVKCLEGQERESLSKMVQMKPYDFTFRLLLHTNE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02581 611 MobiDBLite consensus disorder prediction 278 294 - -
Vifa4g02581 611 Pfam Leucine-zipper of ternary complex factor MIP1 40 121 IPR025757 -
Vifa4g02581 611 Coils Coil 44 71 - -
Vifa4g02581 611 MobiDBLite consensus disorder prediction 1 15 - -
Vifa4g02581 611 MobiDBLite consensus disorder prediction 135 216 - -
Vifa4g02581 611 Coils Coil 90 117 - -
Vifa4g02581 611 PANTHER EXPRESSED PROTEIN 26 608 - -
Vifa4g02581 611 MobiDBLite consensus disorder prediction 16 40 - -
Vifa4g02581 611 MobiDBLite consensus disorder prediction 135 208 - -
Vifa4g02581 611 MobiDBLite consensus disorder prediction 275 294 - -
Vifa4g02581 611 MobiDBLite consensus disorder prediction 1 40 - -
Vifa4g02581 611 Pfam Protein of unknown function, DUF547 401 530 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02581 Vifa-Chr4 785949130 785953051 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02581 - - gmx:100780747 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07107 1 1097237813 1097240348 Vifa4g02581 4 785949130 785953051 PCT