Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02480 ATGAGACATAGGATTTCGTATTTGATGGATGAGATCTGGGAGAGGGCTGTGGAAACGGCGTTAGAAGGCGAGAAAGACCACGCCGCTGCTCGAACGTTAACGCTTGACGGCGCCGTTAAGTGTGTGCAAGGACGTTTACCTCCTCCGAGCCTTCTAGAGAGGTTCCAGAACCTTCAACACCTTTCTATTGCGAACGTTGGTGTTTCTTCTCTGGAGCAGTTCCCGAGGTTGCAGAGTCTTCAGAAGTTGAACCTCTCCGACAACCGGATCGCCGGAGGACTTGAGTATTTGGTTCAGGCGGGGCTTGATTCGCTGCGAGACCTCGATCTGTCGAATAATAGGATTCAATCGATCGAGGATCTCGCGCCGTTGGCGGAGTTGAAGCTTGTTTCGTTGGATCTGTATGAGTGTGCTGTTACTCGGGTTAAGGATTATCGATCTAGGGTTTTTGGCTTGATTAAGTCGCTTAAGTTCTTGGATAAGATGGATGCCGAGGAGAACGAGAGGCCTGAGTCGGATGATGAGGAGGAGGAGGATGAAGAGGAGGAGGAAGAGGAGGAGGATCCTGGGAGTGGTGAGATTGATGGAGGAGAGGAAGATCGACCGTTTGGGATGAGTAATGGTCACAGTGAGGGTGTTGATGGAGTTGTTGATGCTGATGAGGAAGAGGAGAGTGATGCAGATGAGGAGGTGACTGAGAGTTCGAGAGGGAGGGTGAATGGGTTGAACCATCAGGAGAATGGTTTCCATGTTGCTCCTGCTGTGGGTGATGACGGGGAGGAGGAAGATGATGATGAGGATTCTGGGGAAGAGATTGACGAGGAAGAGGGTGATGATGATGATGTGGTTGTGGTTCATGAGATCGATGATAGTGATGATGATGATGACGGGGTTGAGTTTGATGAGGATGATGATGATGACGATGATGATGAGGAGGTCGATAATGATGAAGGGGATTTTGCTGAACCGGAGAGTACTTCTGGACGGTTGGTGAGTACTGAAGGTGAGATCGATGGGCACGAGCAAGGGGAGGAAGATGGAGATGAAGATGACAACGGGGAGACTGGTGAAGATGAGATGGGAGTAGAAGAAGATGACGATGACGATGATGATGTAGAGTTTGAAGATGAAGATGAAGAAGAAGACTATGGTGCTGGATATCTTGTTCAGCCAGTTGGACAGGCTGAGGCTCTCAATGATGATGCTGCTGACATTTTCGAAGTGGAAAACGAGGATGGTGAAGAGGAGGAGGAAGTTGACGATGATGACGATGATGTTCAGGAGGTGTTGCCTCCTGCCTCTTCACACCCCAAGAGGAAGAGGGACACTGATGGTGAAGATGACGAGGAAGATGAAGATGAAGCAGCACTCACAAAGCCATCGAAGAAGCACCATTGA 1398 0.4957 MRHRISYLMDEIWERAVETALEGEKDHAAARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLQSLQKLNLSDNRIAGGLEYLVQAGLDSLRDLDLSNNRIQSIEDLAPLAELKLVSLDLYECAVTRVKDYRSRVFGLIKSLKFLDKMDAEENERPESDDEEEEDEEEEEEEEDPGSGEIDGGEEDRPFGMSNGHSEGVDGVVDADEEEESDADEEVTESSRGRVNGLNHQENGFHVAPAVGDDGEEEDDDEDSGEEIDEEEGDDDDVVVVHEIDDSDDDDDGVEFDEDDDDDDDDEEVDNDEGDFAEPESTSGRLVSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEEDDDDDDDVEFEDEDEEEDYGAGYLVQPVGQAEALNDDAADIFEVENEDGEEEEEVDDDDDDVQEVLPPASSHPKRKRDTDGEDDEEDEDEAALTKPSKKHH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02480 465 MobiDBLite consensus disorder prediction 167 194 - -
Vifa4g02480 465 MobiDBLite consensus disorder prediction 339 384 - -
Vifa4g02480 465 SUPERFAMILY L domain-like 48 164 - -
Vifa4g02480 465 Pfam Leucine-rich repeat 64 174 - -
Vifa4g02480 465 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Vifa4g02480 465 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 20 450 IPR045081 -
Vifa4g02480 465 MobiDBLite consensus disorder prediction 216 230 - -
Vifa4g02480 465 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 13 175 - -
Vifa4g02480 465 SMART LRR_sd22_2 77 99 - -
Vifa4g02480 465 SMART LRR_sd22_2 102 123 - -
Vifa4g02480 465 MobiDBLite consensus disorder prediction 257 321 - -
Vifa4g02480 465 MobiDBLite consensus disorder prediction 402 428 - -
Vifa4g02480 465 MobiDBLite consensus disorder prediction 163 465 - -
Vifa4g02480 465 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Vifa4g02480 465 SMART LRR_typ_2 77 100 IPR003591 -
Vifa4g02480 465 SMART LRR_typ_2 102 125 IPR003591 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02480 - - mtr:11406731 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02480 4 746937815 746940221 Vifa4g02480 4 746937815 746940221 ECH