Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02460 ATGTGGCGAAGGAGCTTCACCACCACCAGCGCTGCCGCAATAAAGGACAAAAAATGGGACGCATTGATCATCGGCGGCGGTCATAACGGCCTCACAGCAGCAGCTTACCTCGCACGTGGCGGCCTCTCAGTTGCCGTCCTCGAGCGGCGCCACATTATCGGAGGCGCCGCCGTAACCGAGGAGCTAATTCCAGGTTTCAAGTTTTCCCGTTGCAGTTACCTCCAAAGCCTTCTCCGGCCGGCAGTTATCAATGAACTCGATTTGGCAAAGCACGGACTGAAGCTTCTGAAGAGAAATCCTTCGTCGTTTACGCCTTGTCTCGATGGACGCTACCTTCTCTTAGGACCTGATAAGGATCTCAATCACTCTCAGATTTCCAAATTCTCACAAGCTGATGCAGAAGCATATCCATTATATGAGAGTCAGCTTGAGAAATTCTGTAAATTCATGGATCTGGTTCTGGATTCGTCTCCACCCGAGTCTTTACAACGTAAATCATCTCTTAATGAGCAACTGAAGAGTAAATTACAGAATTCAGTATTTTGGGCCACTTGTTTGCGGCATGCAGCCTCCATGGGACAAAAAGATATGGTGGAATTTATGGACCTTCTGTTGTCCCCAGCTTCTAAAGTTTTGAATAACTGGTTTGAGGTAACTTCTAAAACAGATGTTCTGAAGGCAACACTTGGAACAGATGCTGTGATAGGATCTACTGCCAGTGTCCACACCCCGGGAAGTGGTTATGTTCTGCTACATCATGTAATGGGAGAAACTGATGGAGAGCATGGAGTTTGGTCATATGTTGAAGGTGGAATGGGTTCAATATCCAAGGCCATTGCTGGTGCTGCTGTCACAGCTGGAGCACATGTTGTGACGAATGTTGAGGTGTCTCAATTGTTGATTAAAAACTCTAGCACTGTCGATGGGGTGATTCTGGCTGATGGTACCGAAGTGCATGCTTCAGTTGTTCTGTCTAATGCAACACCTTATAAAACTTTCATGGAATTAGTGCCCAACAATGTCCTCCCAGATGATTATTTCCGGGCAATTAAGCACTCTGACTACAGCTCTGCCACTACAAAAATAAATGTAGCAGTTGATAAATTGCCTCAATTTCAGTGTTGCAAATCAAATCATTCTCATGTTGGCCCCGAGCATGTTGGCACTATTCATATAGGTTCAGAGAGCATGGAGGAGATTCATTCTGCATCTCATGATGCGGTGAATGGAATACCATCAAGAAGACCGATTATTGAGATGACAATTCCTTCCGTATTAGACAAAACTATATCTCCGCCAGGTATGCATGTGATAAACCTGTTTGTGCAGTATACACCCTTCAAACCATTGGATGGGGACTGGCAAGATCATGACTACAGAGAATCATTTGCACAAAAATGCTTCACATTGATTGATGAATATGCACCTGGTTTCAGCACATCAGTCATTGGTTATGACATGCTGACTCCACCAGATCTTGAAAGAGACTTCGGTTTGACAGGAGGGAATATATTTCATGGTGCTATGGGTTTGGATTCTCTTTTCCTCATGCGACCTGTAAAAGGATGGTCAAACTATAAAACACCACTTAAAGGTTTATACTTATGTGGAAGTGGCGCACACCCCGGCGGTGGGGTTATGGGAGCACCTGGACGCAATGCTGCCCATTTAGTTCTTCAGGATGTCAGAAAAACATGA 1698 0.4511 MWRRSFTTTSAAAIKDKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHIIGGAAVTEELIPGFKFSRCSYLQSLLRPAVINELDLAKHGLKLLKRNPSSFTPCLDGRYLLLGPDKDLNHSQISKFSQADAEAYPLYESQLEKFCKFMDLVLDSSPPESLQRKSSLNEQLKSKLQNSVFWATCLRHAASMGQKDMVEFMDLLLSPASKVLNNWFEVTSKTDVLKATLGTDAVIGSTASVHTPGSGYVLLHHVMGETDGEHGVWSYVEGGMGSISKAIAGAAVTAGAHVVTNVEVSQLLIKNSSTVDGVILADGTEVHASVVLSNATPYKTFMELVPNNVLPDDYFRAIKHSDYSSATTKINVAVDKLPQFQCCKSNHSHVGPEHVGTIHIGSESMEEIHSASHDAVNGIPSRRPIIEMTIPSVLDKTISPPGMHVINLFVQYTPFKPLDGDWQDHDYRESFAQKCFTLIDEYAPGFSTSVIGYDMLTPPDLERDFGLTGGNIFHGAMGLDSLFLMRPVKGWSNYKTPLKGLYLCGSGAHPGGGVMGAPGRNAAHLVLQDVRKT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02460 565 Pfam Flavin containing amine oxidoreductase 30 367 IPR002937 GO:0016491
Vifa4g02460 565 SUPERFAMILY FAD/NAD(P)-binding domain 16 346 IPR036188 -
Vifa4g02460 565 PANTHER PHYTOENE DEHYDROGENASE 5 564 - -
Vifa4g02460 565 Gene3D - 225 370 IPR036188 -
Vifa4g02460 565 Gene3D - 18 110 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02460 Vifa-Chr4 741565499 741571946 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02460 - - gmx:100781247 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02460 4 741565499 741571946 Vifa4g02460 4 741565499 741571946 ECH