Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02442 ATGGCAGCGGAATCATCGGAAGGCGAAGAAGAAGGAAAGTTAAGCGGCGGCAACCAGATATTGGCCGTCGACGACGACCTCCGCGAATTGGGGAAAAAGGCCGCCTGGAGCGTCAGTTCCTGCAAACCTGGCAACGGCGTCTCTTCTCTCCGAGATGATAATCTCGAAACCTATTGGCAATCTGACGGAGCTCAACCTCATTTTGTTAACATTCAGTTCCAAAAGAAAGTTCGATTACAATTAGTTGTGCTATATGTGGATTTCAAGCTTGATGAGAGTTACACTCCCAGTAAGATTTCCATTCGCGCCGGAGACGGCTTTCACAACCTCAAGGAGATAAAAGCTGTGGAACTTGTGAAACCAACTGGTTGGCTTTATCTTTCATTATCTGGACTTGATCCTCGTGAAACTTTTGTCAACACATTTATGTTACAAATTGCTGTGTTGTCAAACCATCTCAATGGAAGGGATACTCATGTGCGGCAGATCAAAGTTTATGGGCCTAGACCGAACCCCATTCCACAGCAGCCATTTCAATTTACTTCAAGAGAGTTCATCACCTATTCTACTATAAGATGA 579 0.4491 MAAESSEGEEEGKLSGGNQILAVDDDLRELGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVELVKPTGWLYLSLSGLDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPFQFTSREFITYSTIR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02442 192 ProSiteProfiles DOC domain profile. 6 192 IPR004939 -
Vifa4g02442 192 Pfam Anaphase-promoting complex, subunit 10 (APC10) 22 189 IPR004939 -
Vifa4g02442 192 PIRSF APC10 2 192 IPR016901 GO:0005680|GO:0031145
Vifa4g02442 192 Gene3D - 1 169 - -
Vifa4g02442 192 SUPERFAMILY Galactose-binding domain-like 23 168 IPR008979 -
Vifa4g02442 192 CDD APC10 28 167 IPR016901 GO:0005680|GO:0031145
Vifa4g02442 192 FunFam Anaphase-promoting complex subunit 10 1 169 - -
Vifa4g02442 192 SMART APC10_2 27 191 IPR004939 -
Vifa4g02442 192 PANTHER ANAPHASE-PROMOTING COMPLEX 10 18 192 IPR016901 GO:0005680|GO:0031145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02442 K03357 - gmx:100526925 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02442 4 736045372 736047105 Vifa4g02442 4 736045372 736047105 ECH