Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02440 ATGGCTTCTTGTATATCCACCCCCTCTCCTTCTTCCCGATTACAACTCAATAAAACAACCTTCATTGCTGCAACTTCACTCCCTCTCTATCACAGAAGTAAATGTGAATTGAACAGAAGGAGTTTAGCAGTTAGAGGAATTGTAGCAACTGGAGTTTCAGCTATGGCTATGGCTTCCACTCTTACTTCTCAACCTCAACCACCTCAAGAGAAGGGACTTGAAAGATTAGCATATAAAGCTGAAGGGTACAATTATTGGAAGTGGAAGGATCATAACATTCACTATGTTGTACAAGGAGAAGGACCTCCTCTTGTTCTTATTCATGGTTTTGGTGCATCTGCTTTCCACTGGAGATACAATATTCCAGAATTGGCGAAGAAACACAAGGTTTATGCCTTAGACTTGCTTGGATTTGGGTGGAGTGACAAAGCACTCGTCGACTATGATGCCATGGTGTGGAGGGATCAAGTCACAGACTTCTTGAAGGAAATCGTAAAAGAACCAGCTGTTTTGGTTGGAAACAGCCTTGGAGGATTTACTGCTTTGATTGCAGCAACCGGGTTGCCTGAGTTTGTCAACGGGGTCGTTCTACTGAATTCTGCAGGACAATTTGGTGATGGAAATAAGGAACGTAAAAACTCCGAGGAAACAACACTACAAAAGTTTTTCCTAAAGCCTTTGAAGGAAGTTTTCCAGCGTGTAGCTCTCGGATTTATATTCTGGCAATCGAAACAACCCACTCGGATTAAATCAGTCTTAAAAAGTGTGTATGTAAACTCTTCCAATGTGGATGATTATCTTGTGGAATCTATAACAAGGCCAGCTCAAGACCCCAATGCAGGAGAAGTTTATTACAGGTTAATGACGCGCTTCATGATGAATCAGAGCAAGTACACTCTAGATTCCGTGTTAAGCGAACTCTCTTGCCCGTTGCTTCTGCTATGGGGTGACCTTGATCCATGGGTTGGTCCAGCCAAAGCTAATAAAATCAAAGAGTTTTATCCGAAAACAACTCTCGTTCACTTGCAAGCCGGGCATTGTCCACACGACGAGACACCCGAGCTTGTTAACACAGCATTGTTGGACTGGCTCACAACCCTTACTCCTCAAGTCACTCTCCAAACAGTTTGA 1131 0.4315 MASCISTPSPSSRLQLNKTTFIAATSLPLYHRSKCELNRRSLAVRGIVATGVSAMAMASTLTSQPQPPQEKGLERLAYKAEGYNYWKWKDHNIHYVVQGEGPPLVLIHGFGASAFHWRYNIPELAKKHKVYALDLLGFGWSDKALVDYDAMVWRDQVTDFLKEIVKEPAVLVGNSLGGFTALIAATGLPEFVNGVVLLNSAGQFGDGNKERKNSEETTLQKFFLKPLKEVFQRVALGFIFWQSKQPTRIKSVLKSVYVNSSNVDDYLVESITRPAQDPNAGEVYYRLMTRFMMNQSKYTLDSVLSELSCPLLLLWGDLDPWVGPAKANKIKEFYPKTTLVHLQAGHCPHDETPELVNTALLDWLTTLTPQVTLQTV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02440 376 Gene3D alpha/beta hydrolase 78 367 IPR029058 -
Vifa4g02440 376 PRINTS Alpha/beta hydrolase fold signature 171 184 IPR000073 -
Vifa4g02440 376 PRINTS Alpha/beta hydrolase fold signature 185 198 IPR000073 -
Vifa4g02440 376 PRINTS Alpha/beta hydrolase fold signature 127 142 IPR000073 -
Vifa4g02440 376 FunFam Alpha/beta fold hydrolase 81 367 - -
Vifa4g02440 376 Pfam Alpha/beta hydrolase family 104 357 IPR000073 -
Vifa4g02440 376 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 33 368 - -
Vifa4g02440 376 SUPERFAMILY alpha/beta-Hydrolases 84 364 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02440 Vifa-Chr4 735424888 735427303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02440 103 354 Acyl Lipid Metabolism Gene Families AT3G10840 24.671 1.31e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02440 - - gmx:100776976 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02440 4 735424888 735427303 Vifa4g02440 4 735424888 735427303 ECH