LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa4g02437	ATGGAAAGTGCAATGCATTCTCGCCAACCGAACAAGGTATCCGTTACGCTTCCCAAGAAAATCACCAACGGTACTTTCTCATCTGCCAAAACTCTATACAACGACGTTAACGGTGGTCCACCGAAGTTCACCGCCTCCTCTATCTCGCCCCGGTTTGAAGACTACGGCGAGATATTCTCGAGCTTCCACTCCGCTCGCTCTTCCTCCATTCCGGTGTTGGATCTTCCGGCAGTTGACGCCGGCGAGGTTTTTTTCGACTTCCGTCGTAACGCTTTTGACTATGCTGAGGTCTTTGGAGGCTCCGGGGGTCTGGACTTTTGGTCTTCGCACGATGACTTGTTTCGTGACTGTGACTATGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGTCTGGACTTCAGTAGAAACCGATTCATTTTCGGGAGACTTGGACCGTTTTGGAAATAATGTAGGCGTATCAAGTGGTGGTCTCATCCAGTCCGTTGATGGAGATACAGAGTTCAACATTTCGTTTCATAAGGTTAATGGTACAAGCAATGAAGATATGTCAAAGGGGAAAGCCCACACAGCTCAATTGCATTCTGTTCCTGGTGTCACTCATGTAGTTGATGAAACCACACTATTTCATAGGACTGATCCATCCTTGCAGGTTGTGGATGACATTGACCTTGATATGGAATTTAATGCAGGCAGGGGAAAGAGAAACCATCATAAGAAAATGATGTCGCGTCCCTGTAATGTATCTTCTGGTGAACAGATTCTCTGTTGTGATCTTGATCTACATGATGGATACAACAGAAATGATTCTCATTCCAGTGAGATGTTCATAACCGTGTCTGATGTCAGCCTCAGAACCATACCATCTCAATTGCCACCTCCTTGCCGGCCACCACCTTTATTAGATCCAAGCAAGGGATACACTAGTGAATCTCATTCCAACAGTGAGCGGATTGATTCTGAAGATACTTTAGGTGACGGTTCGCCACCTTTCTTTGATGTGGAGGTTGATATTAATTCGTCTGCTTCTGTTGTGAAAGAAGCCACTGACAGATCAGAAGCAAAAGTTAGGAATGTAAAAGATCTGAAGGGGAGAAAGAAGAGGGGTTCTGAAAGCTGCATAAAATCAACTTTGGATGTAAAAACAAATGAAACAGAGATGAGTGAGAATATAACTAGATTTAATAGTTTGAACGATGAGAGAGTGCTTCCTACTTGTGATCGAAGATTTGGCAAAATAGAAATTTCCGCCACAGATGAAAGGCAGAAAGCTAGGAAGGCAGTTCCAGTAATTCCAGAACCATTAGAAGGGAAAAAACAATTAAACTTGTTCGAGGAAAAGCACATGAAGGAATCCAGGTCATCTCAAGAATCAGATCAAAGTATTGGAGTTGGGACATGGAAAGAAGCAACTGAATTTATTGAATTGGTGGGAACAAAAGAATCTCAAAAGGTAGTTCATCCCATAAATGATACCAACTGTTTGGTGCAAGATGCCAGAACATTTGAGCATTGGAGGAAAGAAGGAGAAGCATCTAATATCCAAGAAGAATACAAAAAGGTAAAAGCGAGTCTAGAAAGTTATCAGCCTGACGAACACAAGAACAAATCTAAAGTAGAAAGAGGGGCTGAACAGGTAAAAAACATTAGGAGATCTAAATCATCTAATGTGGAATGCAGACAGAGAGAGCCTACAAGGAATGACAAAATTACTGAAACTTTTGAGCTTGAAAAGAGTGAGAAGATAAGAATGGTCAGCCAACATGGAAAAACTGAGAAGAAAGCAACTAAAGCAAATCGAGTGAGAAGTGAGATATCAAAAGAGGTTGATGGACAAGAACTAAGTGAAATTCAGTTTAGCTTGAAGCTTAAAGAAAATGAGAAGAAATTAAAACAGAATGGAGAGCAGCATCCAGGTGTGAAAAACCACAAGCAGCCTCAAATAATGAAAGAAAATGAAACAGTTCAAAGAGAAGCTTTTGCTCCTGAAGCAGCAGAGGGCGAGGAAAGAGTAAAAAATTCTGAGGAGCTTGAGAAAATTAAAGGAAGATCAAATCAAACTATTAAGCTGGATAAGCCCGAAGAGAATGTAACTTGCACAAGGGAAAATGATATCATCTCCGAACAACATATACAGAACAGAAGTGGACTCGAAGAAAGCCAAAAAGGTTATTTTAAAAACAAAGGAAGTAGTGAAGGCCAAAAGCCTGCTCATAGGCGGGTAGTGAATGAAAAAAGGCTTAAAGAAGACGACTTTGAATCAGGTTTGAACAAGATAAAAACTGAAGAGGCATTTGAGCGCAGGACAAATGAGGCATGTGTAGAAGATCAAAGTAAAGAAAAATTCAAATTGGTTTCTAATGAATGTGGAAAATCAAATAGACTTGAAGAAACAAGTGAGAGCGAAGGGACTTTGAAAGCTCGGAAACAAGCTATAGAGCTAGAAAGACGAAGTGGAAATGAGGCTCAGATGAAACAAGAAACTGAGAGTATTTCAAACCAAACATGTGACAGGGAAGCACCTTTAGGTATATCAAATGAGAATAGTCACTCCAAGCAACCTGAGAAGATACTCAAAGACGCAGGTAGGAGTGAAAAAGTTGAGGGGTTTGATATAGCTTTGGAGCAAATGGAAGTGAATAGAGAATGTATGAGCATGGAATTTGCTAAAGAAACCAATGAAAAATGGAAAGCACAACATGGCGAAAATCTTCTGGCAGCTCATTCATCCACCATTCATGAAGAAAATATTGGAAAACCGGGGTTATCTCTAGAACCTGTCGCTGATCATGAAATTGGAGAAGCTAGAACTGACTGCAAAATTGGTGGAAGGAAATTGGAAGAGGAAGGGGTAGAAAAAATAACAGCTAGCGAGAAAATAACTTCTTTTCAAATGTCCCAAGGAAAAGAAGAGGTTTCTGGGGCACAATCAGGAAAGATGGATTGTAGCATGAGGCACACCAATGAACTTTGTTGTAGTAGTGAACATGCGTGCACCGAGAAAGCTAAAACTGTCCCTCAAATGGAAGGAAGTAGGAACCTGAAGTCGTCAAGCCAAGTAAACACATGCGATGATTACAAAATGAGCACATTAGTGGATAAACCTGCTGCAGTTCAAGAAGCAGTAGATGTCCACAACACTTCCCAAAGGTCTCATATAGCCCATTCCACAAAAATCAAAGAGAAGGGTCTTAATGAAACTCCTGCCTCAGTAGAGAAAGATGCTGAAAAGCCGAGAATAGAAAGCGAATTAGAAAAAGAACGCCTCAGAAAGATAGAAGAAGAGGTGGAGAGAGAAAGGGAAAGGCAGAAAGATAGAATGGCTGTTGACAGAGCAATGCTGGAGGCTGAGAGAGAAAGGGAAAGAGAAAAAGATAGAGCGGCTGTTGATAGAGCAACTTTTGAAGCCCGTGATAGAGCATATGCTGAAGCCCGGGAAAGAGCAGAAAGGGCTGCATTTGATAGAGCAACAGCTGAAGCTCGACAAAGAGCACTGACTGAGGCCAGGGAAAGACTCGAAAAGGCCTGCGCTGAGGCTAGGGACAAATCGTATGCTGATAAAGCAACTGCAGAAGCCAGGTTGAAGGCAGAACGTGCTGCTGTTGAAAGAGCAACTGCAGAGGCTCGAGAGCGTGCAATGGAAAAAGTAAGGGTTGAGAGAGCTGCATTTGGGTCCAGAGAACGATTAGATAGATCTGTATCTGATAAATTTGGCGTTTCATCCAGAAATGATGGAAGAATGGGCACCTCATCATCTGATATACCTGATCCACAGTTTCACAACTTCAGTTCTGTCCCTGGTTCTAGACATCCATATTCAATTTATGGTGCTTCTTCTTTCACCGAGAGATCTGAAGGTGAATCAGCTCAGAGGTGTAGAGCTAGACTGGAGAGGTGTCGTCGAACAGAAGACCGTGCAGCAAAAGCTTTGGAAGAAAAGAACATGCGAGACCTTCTAGCTCAGAAGGAGCAAGCAGAGAGAAGTAGATTAGCGGAGACTCTGGATACTGAAGTCAGAAGGTGGTCAAGTGGAAAAGAAGGAAACCTGCGTGCATTGCTTTCAACCTTGCAATATATCCTTGGGCCTGATAGTGGATGGCAGCCAATTCCACTCACGGAGGTAATTACTTCTGCTGCTGCAAAGAAAGCTTACAGGAAGGCAACCCTTTGCGTCCATCCCGACAAATTACAGCAACGTGGAGCAAGTATTCAACACAAATACATATGTGAAAAAGTCTTTGATCTCTTAAAGGATGCTTGGAGCAAATTTAACTCCGAAGAAAGATAG	4284	0.4206	MESAMHSRQPNKVSVTLPKKITNGTFSSAKTLYNDVNGGPPKFTASSISPRFEDYGEIFSSFHSARSSSIPVLDLPAVDAGEVFFDFRRNAFDYAEVFGGSGGLDFWSSHDDLFRDCDYEEEEEEKEEEVWTSVETDSFSGDLDRFGNNVGVSSGGLIQSVDGDTEFNISFHKVNGTSNEDMSKGKAHTAQLHSVPGVTHVVDETTLFHRTDPSLQVVDDIDLDMEFNAGRGKRNHHKKMMSRPCNVSSGEQILCCDLDLHDGYNRNDSHSSEMFITVSDVSLRTIPSQLPPPCRPPPLLDPSKGYTSESHSNSERIDSEDTLGDGSPPFFDVEVDINSSASVVKEATDRSEAKVRNVKDLKGRKKRGSESCIKSTLDVKTNETEMSENITRFNSLNDERVLPTCDRRFGKIEISATDERQKARKAVPVIPEPLEGKKQLNLFEEKHMKESRSSQESDQSIGVGTWKEATEFIELVGTKESQKVVHPINDTNCLVQDARTFEHWRKEGEASNIQEEYKKVKASLESYQPDEHKNKSKVERGAEQVKNIRRSKSSNVECRQREPTRNDKITETFELEKSEKIRMVSQHGKTEKKATKANRVRSEISKEVDGQELSEIQFSLKLKENEKKLKQNGEQHPGVKNHKQPQIMKENETVQREAFAPEAAEGEERVKNSEELEKIKGRSNQTIKLDKPEENVTCTRENDIISEQHIQNRSGLEESQKGYFKNKGSSEGQKPAHRRVVNEKRLKEDDFESGLNKIKTEEAFERRTNEACVEDQSKEKFKLVSNECGKSNRLEETSESEGTLKARKQAIELERRSGNEAQMKQETESISNQTCDREAPLGISNENSHSKQPEKILKDAGRSEKVEGFDIALEQMEVNRECMSMEFAKETNEKWKAQHGENLLAAHSSTIHEENIGKPGLSLEPVADHEIGEARTDCKIGGRKLEEEGVEKITASEKITSFQMSQGKEEVSGAQSGKMDCSMRHTNELCCSSEHACTEKAKTVPQMEGSRNLKSSSQVNTCDDYKMSTLVDKPAAVQEAVDVHNTSQRSHIAHSTKIKEKGLNETPASVEKDAEKPRIESELEKERLRKIEEEVERERERQKDRMAVDRAMLEAEREREREKDRAAVDRATFEARDRAYAEARERAERAAFDRATAEARQRALTEARERLEKACAEARDKSYADKATAEARLKAERAAVERATAEARERAMEKVRVERAAFGSRERLDRSVSDKFGVSSRNDGRMGTSSSDIPDPQFHNFSSVPGSRHPYSIYGASSFTERSEGESAQRCRARLERCRRTEDRAAKALEEKNMRDLLAQKEQAERSRLAETLDTEVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAAKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKDAWSKFNSEER	1427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	1237	1264	-	-
	Vifa4g02437	1427	Coils	Coil	1154	1181	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	661	700	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	287	331	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	701	727	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	814	862	-	-
	Vifa4g02437	1427	FunFam	Auxilin-related protein 1	1298	1427	-	-
	Vifa4g02437	1427	Coils	Coil	1078	1125	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	823	850	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	528	562	-	-
	Vifa4g02437	1427	SUPERFAMILY	Chaperone J-domain	1259	1426	IPR036869	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	1045	1081	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	660	739	-	-
	Vifa4g02437	1427	Gene3D	DnaJ domain	1301	1427	IPR036869	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	1235	1264	-	-
	Vifa4g02437	1427	MobiDBLite	consensus disorder prediction	1053	1081	-	-
	Vifa4g02437	1427	Coils	Coil	1186	1210	-	-
	Vifa4g02437	1427	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	1114	1427	-	-
	Vifa4g02437	1427	Coils	Coil	1307	1327	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa4g02437	Vifa-Chr4	734695137	734701469	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa4g02437	-		-	psat:127074594	2347.39

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa4g02437	4	734695137	734701469	Vifa4g02437	4	734695137	734701469	ECH