Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02422 ATGGGACTACACATGAATGGGAGCGATGAAGAAGTAAGCTATGCAAAAAACTCCTCACTTCAGAGAAAGGTGATTTCTTTGACAAAGCCTTTGAGAGAAGAAGCCATAACAAATTTGTACTGCGACACACTGCCCAAAAGTTTGGCAATTGCAGACTTAGGTTGTTCTTCTGGACCAAACACTTTGTTAGTGATCTCAGAATTTATCAAGGTCGTGGAAAATCTTTGTCGAAAATTTAATCACAAATCTCCTGAATATAAAGTCTTTATGAACGATCTATCTGAAAACGACTTCAACAGCGTATTTAAGTCTCTTGACACCTTCAAAGAAAACCTATACCATGAAATGAAAACTGAAATAGGTCCTTGCTATTTCTTTGGGGTTCCTGGTTCCTTTTATGGAAGAATTTTTCCAGATAAAAGTTTGCATTTTGTTCATTCCTCTTACGGTCTTCATTGGCTTTCAAAGGTTCCGGAGGGTGTAGACAACAACAACAAAGGCAATATTTACCTGTCAAGCACAAGTCCTTCAAATGTCCTCAAAGTTTACTATGAGCAATTTCAAAGAGATTTTTCTCTTTTTCTCGAGTGTCGTGCCAAAGAATTAGTTGAAGGTGGTTGTATGATTCTAACAATTCCAGGTAGAAAAGTTGATGATCCATCAAATAAAGAGTGTTGTTACATTTGGGATCTCATGTCAATAATTCTTAATGACATGGTTTTGGAGGGAATCATTAGCAAAGAGAAACTTGATACTTTCAACATTTCAATATATTTTCCTTCTCCATTTGAAGTGAATAAGGAAGTTCTCAAAGAAGGATCATTCACAATTAATAAACTGGAGATTTCTGAAGTGAATTGGAATACTCTTGATCATTGGGAAGCTTTGGACATTGGATCTGAAATGTCAAAATCATTCAAAGACGATGGATACAATATGGCACAATGCGTTAGGGCTGGGATTGAATCTTTACTAGTTTGTCACTTTGGCAAGAGTGTGATTGAAGAGATATTTGACCGCTATAAAAATATTTTAAGTGATCGAATGTCTAAGGAGAGAACTAAGTTCACCAATCTTACCTTATTGTTGACTAGAAAGCCATGA 1104 0.3596 MGLHMNGSDEEVSYAKNSSLQRKVISLTKPLREEAITNLYCDTLPKSLAIADLGCSSGPNTLLVISEFIKVVENLCRKFNHKSPEYKVFMNDLSENDFNSVFKSLDTFKENLYHEMKTEIGPCYFFGVPGSFYGRIFPDKSLHFVHSSYGLHWLSKVPEGVDNNNKGNIYLSSTSPSNVLKVYYEQFQRDFSLFLECRAKELVEGGCMILTIPGRKVDDPSNKECCYIWDLMSIILNDMVLEGIISKEKLDTFNISIYFPSPFEVNKEVLKEGSFTINKLEISEVNWNTLDHWEALDIGSEMSKSFKDDGYNMAQCVRAGIESLLVCHFGKSVIEEIFDRYKNILSDRMSKERTKFTNLTLLLTRKP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02422 367 FunFam Jasmonate O-methyltransferase, putative 27 158 - -
Vifa4g02422 367 Pfam SAM dependent carboxyl methyltransferase 34 365 IPR005299 GO:0008168
Vifa4g02422 367 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 3 354 IPR005299 GO:0008168
Vifa4g02422 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 366 IPR029063 -
Vifa4g02422 367 Gene3D Vaccinia Virus protein VP39 17 353 IPR029063 -
Vifa4g02422 367 Gene3D - 3 352 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02422 Vifa-Chr4 730070178 730071633 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02422 K21483 - gmx:100813166 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02422 4 730070178 730071633 Vifa4g02422 4 730070178 730071633 ECH