Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02417 ATGGATCTAAAACAGGTATTGCACATGAATGGTGGCAACGGAGAAGAAGGTTATGCAAACAATTCCTTACTTCAGAGAAAGGTTATTTCTATGACAAAATCTCTGAGAGACGAAGCTATAACCAACGTGTACAGCAACACAAAGCCAGAAAGTTTAGGAATTGCAGATTTGGGTTGTTCTTATGGCCCAAACACTTTTTTGGTGATCGCAGAAGCTATCAAAGCTGTGGAAAAGTTTTGTCAAGAACAGAAACAAAAATCTCCAGAATATAAAGTATTCTTGAACGATCTACCAGGGAACGACTTCAACAATGTGTTTTTGTCTTTCGACGCGTTCAAAAAAAATCTTATTAGTGAAGTGAAAACTCAAATGAGTCCTTTATATTTCTTTGGAGCACCTGGTTCCTTTTATGATAAGCTTTTTCCTAATAAAAGTTTGCATTTTATTCATTCTTCATATAGCCTTCAGTTTCTATCTAAGGTTCCTGAGGGTATAGACAACAACAAAGGCCACATTTACTGGGCTAAGACAAGTCCTCCAAATGTTTTGAAAGCTTACCTTGAACAATATAAAGCAGATTTGTCTTTCTTTCTCAAGTGCCGTGCTGAAGAATTAGTTGAAGGGGGTCGTTTGGTTGTAACTTTAATCGGTGAGGATCCAGTTAACAAGGATCGTGGTTTCATTTGGGAAATCATGTCTATGGGTCTTAATGATATGGTCAAACAGGGAATCATAAAAGAAGAAAAGGTCAACAGTTTCAACATCCCTCTCTATTATCCATCTCTAGCTGAAGTGAAGAAGGAAATTGACACACAAGGATCATTTGACATCAATTATTTGGAGACTTCTCAAGTGAATTTAGCTGAACTTGATAATTGGGATGATTTGGATTTTACCTCTAAAAAGCCCGAATCACTCAAAGATGGTGGATACAATATGGAAAACAGTTTTAGAGCTGTGGCTGAACCTATGCTAACTGGCCATTTTGGTGAAAGTGTTACTAAAGAAGCTTTTAACCGCTTTCTGAAACATATGGCTGATCAGATGCCCAAAGATAAAAGACCTAAGCTCACCAATATTACCATGTCATTAATTAGAAAGGCTTTTTAA 1110 0.3685 MDLKQVLHMNGGNGEEGYANNSLLQRKVISMTKSLRDEAITNVYSNTKPESLGIADLGCSYGPNTFLVIAEAIKAVEKFCQEQKQKSPEYKVFLNDLPGNDFNNVFLSFDAFKKNLISEVKTQMSPLYFFGAPGSFYDKLFPNKSLHFIHSSYSLQFLSKVPEGIDNNKGHIYWAKTSPPNVLKAYLEQYKADLSFFLKCRAEELVEGGRLVVTLIGEDPVNKDRGFIWEIMSMGLNDMVKQGIIKEEKVNSFNIPLYYPSLAEVKKEIDTQGSFDINYLETSQVNLAELDNWDDLDFTSKKPESLKDGGYNMENSFRAVAEPMLTGHFGESVTKEAFNRFLKHMADQMPKDKRPKLTNITMSLIRKAF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02417 369 Pfam SAM dependent carboxyl methyltransferase 38 366 IPR005299 GO:0008168
Vifa4g02417 369 Gene3D - 6 352 IPR042086 -
Vifa4g02417 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 367 IPR029063 -
Vifa4g02417 369 Gene3D Vaccinia Virus protein VP39 21 353 IPR029063 -
Vifa4g02417 369 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 350 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02417 Vifa-Chr4 728845206 728847114 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02417 K21483 - gmx:100813166 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02417 4 728845206 728847114 Vifa4g02417 4 728845206 728847114 ECH