Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02414 ATGGATTTAAAACAGGTAATACACATGAACGGTGGCGACGGAGAAGAAGGCTATGCAAACAACTCCTTACTTCAGAGAAAGGTTATTTCTTTGACAAAATCTATAAGAGACGAAGCCATAACCAATGTCTACCGCAACACAAAGCCAGAAAGCATAGGAGTTGCGGATTTGGGTTGCTCTTATGGAGCAAACACGTTTTTGGTGGTTGCAGAAGCTATCAAAGCTGTGGAAAAGTTTTGTGAAGAACAGAAACAAAAATCTCCAGAATATAAAGTATTCTTGAATGATCTACCAGGGAACGACTTCAACAATGTGTTTTTGTCTTTCGACGCGTTCAAAAAAAATCTTATTAGTGAAGTGAAAACTCAAATGAGTCCTTTATATTTCTTTGGAGCACCTGGTTCCTTTTATGATAAGCTTTTTCCTAATAAAAGTTTGCATTTTATTCATTCTTCATATAGCCTTCAGTTTCTATCTAAGGTCCCTGAAGGTATAGACAACAACAAAGGCCACATTTACTGGGCTAAGACAAGTCCTCCAAATGTTTTGAAAGCTTACCTTGAACAATATAAAGCAGATTTGTCTTTCTTTCTCAAGTGCCGTGCTGAAGAATTAGTTGAAGGGGGTTGTTTGGTTGTAACTTTAATTGGTGAAGATCCAGCTTACATGGATTGCGGTTTCATTTGGGAAATCATGTCTATGGCTCTTAATGATATGGTCAAACAGGGAATCATAAAAGAAGAAAAGGTCAACAGTTTCAACATCCCTCTCTATTATCCATCTCTAGCTGAAGTGAAGAAGGAAATTGACACACAAGGATCATTTGACATCAATTATTTGGAGACTTCTCAAGTGAATTTCGCTGAACTTGATAATTGGGATGATTTGGATTTTACATCTAAAAAGCCTCAATCACTCAAAGATGGTGGATACAATTTGGCTACCAGTTTTAAAGCTATTGCTGAACCTATGCTAACAGGTCATTTTGGTGAAAGTGTTACTAAAGAAGCTTTTAACCGCTTTCTGAAACATCTAGCTAATCACATGCCTAAAGATAAACTTAGGATCACCAATATTACCATGTCATTAACTAGAAAGCTGGTGTAG 1107 0.3686 MDLKQVIHMNGGDGEEGYANNSLLQRKVISLTKSIRDEAITNVYRNTKPESIGVADLGCSYGANTFLVVAEAIKAVEKFCEEQKQKSPEYKVFLNDLPGNDFNNVFLSFDAFKKNLISEVKTQMSPLYFFGAPGSFYDKLFPNKSLHFIHSSYSLQFLSKVPEGIDNNKGHIYWAKTSPPNVLKAYLEQYKADLSFFLKCRAEELVEGGCLVVTLIGEDPAYMDCGFIWEIMSMALNDMVKQGIIKEEKVNSFNIPLYYPSLAEVKKEIDTQGSFDINYLETSQVNFAELDNWDDLDFTSKKPQSLKDGGYNLATSFKAIAEPMLTGHFGESVTKEAFNRFLKHLANHMPKDKLRITNITMSLTRKLV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02414 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 366 IPR029063 -
Vifa4g02414 368 Gene3D Vaccinia Virus protein VP39 21 353 IPR029063 -
Vifa4g02414 368 Gene3D - 6 352 IPR042086 -
Vifa4g02414 368 Pfam SAM dependent carboxyl methyltransferase 38 365 IPR005299 GO:0008168
Vifa4g02414 368 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 351 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02414 Vifa-Chr4 727533851 727535449 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02414 K21483 - gmx:100813166 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02414 4 727533851 727535449 Vifa4g02414 4 727533851 727535449 ECH