Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02411 ATGGCACGCCACAACACCACCACTCTTCGCGTTTTCTGCGTCGGAACGCTAGACACCAAGCTCCACGAGCTCCGTTATCTCTCCGATTCGCTTCGCTCCAATCTCCATCGCTTCTCCGATCACACTTCCCCCAAGATTGATGTTGTGGTGGTTGATGTTTCTACCGGTCCGAACCAGCCAGAATCATTACCAGATTTCACATTCGTTTCCAGAAACGATGTTATCTCTTGCATCGACACCGCCAATCTTCTTCCACAAGACAGAGGAGAAGCAGTTTCCGTTATGAGTAAAGCGCTCCAACAATTCTTACAGAAATCTAACTCGGATCGATGTGTGGCAGGCGTTATCGGCGTTGGCGGTAGTGGAGGCACATCGCTTTTGTCATCTTCGTTCAGGTCTCTTCCGCTCGGGATCCCTAAGCTCATTGTATCAACGGTTGCTAGTGGCCAAACGGAACCTTACGTTGGAACTTCTGATTTGGTTTTATTTCCGTCCATTGTTGATGTTGCCGGTATTAATAGTGTTAGTAGGGTGGTTTTTTCCAATGCTGCTGCTGCTTTCGCTGGGATGGTTGTTGGAAGGGTTCAAAGTTTGAGTGATTCTTCTCGAGTTGATGATAAGGCTACTGTTGGAGTTGGTGGCAGAGCCATGGAGAATTTGATTAGAGAGGGATTTATACAGGGTGTTTTGGACATCACAACGACAGAGGTAGCAGACTACATAGTTGGAGGCGTAATGGCTTGCGATAGTTCTCGCTTTGATGTCATAATAGAACAGAAAATCCCACTGGTCTTGAGTGTGGGAGCATTAGACATGGTAAATTTTGGAGCAAAAGATACCATACCACAGACTTTTCAGCAGAGAAATATATATGAACACAATAAGCAGGTTTCACTCATGCGAACAACAGTGGATGAGAACAGGAAATTTGCTGACTTCATAGCAAATAAGCTGAACAGTTCATCATCTAAGATCTGTGTTTGCCTCCCGGAAAAAGGTATATCTGCTTTAGATGCACCAGGTAAGCCTTTTTATGATCCAGAGGCAACAGGTACACTTCTTCTTGAATTACAAAGACTTATTCAGACTGATGATATTCGACAGGTGAAGGTGTATCCCCATCATATTAATGACCTTGAATTTGCAAATGTATTAGTGGATGCATTTTTAGAAGTTAATGAAAAGAAAGGTTCTACTCATCCACAAGTAGCCATTCCTGAATCTGTTGAACACTTCCATGAAGATTCTGTTTCAAATAAATCAAGTTTTGGGACTATTGTCTATGCACCTAATGAATTCCCAGATGCAAAACCAGAAACTTTGAAGAAAACACAGCTAATATTGCAGCAATTTAGATATCAAATAGATAAAGGAATTCCTATTATAGGAGCCGGTGCTGGGACTGGAATATCTGCCAAGTTTGAAGAATATGGAGGAGTTGACTTAATTATATTGTACAACTCAGGGCGCTTCCGAATGGCTGGGAGAGGTTCATTAGCAGGGTTATTACCATTTGCCGATGCTAATGCTGTTGTGCTTGACATGGCCAATGAAGTTCTGCCAGTGGTAAAGAAGGTACCAGTTCTTGCTGGTGTATGTGCAACTGATCCCTTCCGACGAATGGATCACTTCCTTAAACAGGTGGAGTCTACTGGATTCTCTGGGGTACAAAACTTTCCAACTGTTGGGTTGTTTGATGGTAATTTTAGGCAAAATCTTGAAGAAACTGGCATGGGATACAGCTTGGAAGTTGAGATGATCCAAAAAGCTCATAAATTGGGGCTCTTGACAACTCCGTATGCATTCAATCAATATGAAGCTATTGAAATGGCCAAAGTTGGCGCCGATATTATTGTTGCCCATATGGGTCTAACCACAACAGGCTCCATAGGTGCAAAAACTGCTGTTTCACTTGATGAAAGTGTAGTTCTTGTACAAGCTATTGCAGATGCAGCACATAGGATCAATCCTAATACTATTGTGCTATGCCACGGGGGCCCAATTTCTGGTCCAGAAGAGGCAGAATTTATATTGAAGAGAACCAAAGGAGTCCATGGTTTTTATGGGGCTTCAAGCATGGAAAGACTACCAGTGGAACAGGCTATCACAAATACAGTCAAACAATACAAGTCAATCTATATTCATTGA 2148 0.4269 MARHNTTTLRVFCVGTLDTKLHELRYLSDSLRSNLHRFSDHTSPKIDVVVVDVSTGPNQPESLPDFTFVSRNDVISCIDTANLLPQDRGEAVSVMSKALQQFLQKSNSDRCVAGVIGVGGSGGTSLLSSSFRSLPLGIPKLIVSTVASGQTEPYVGTSDLVLFPSIVDVAGINSVSRVVFSNAAAAFAGMVVGRVQSLSDSSRVDDKATVGVGGRAMENLIREGFIQGVLDITTTEVADYIVGGVMACDSSRFDVIIEQKIPLVLSVGALDMVNFGAKDTIPQTFQQRNIYEHNKQVSLMRTTVDENRKFADFIANKLNSSSSKICVCLPEKGISALDAPGKPFYDPEATGTLLLELQRLIQTDDIRQVKVYPHHINDLEFANVLVDAFLEVNEKKGSTHPQVAIPESVEHFHEDSVSNKSSFGTIVYAPNEFPDAKPETLKKTQLILQQFRYQIDKGIPIIGAGAGTGISAKFEEYGGVDLIILYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDHFLKQVESTGFSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIQKAHKLGLLTTPYAFNQYEAIEMAKVGADIIVAHMGLTTTGSIGAKTAVSLDESVVLVQAIADAAHRINPNTIVLCHGGPISGPEEAEFILKRTKGVHGFYGASSMERLPVEQAITNTVKQYKSIYIH 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02411 715 Gene3D Aldolase class I 438 690 IPR013785 -
Vifa4g02411 715 Gene3D Uncharacterised protein family UPF0261, NN domain 1 197 - -
Vifa4g02411 715 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 445 635 IPR015813 GO:0003824
Vifa4g02411 715 CDD Tm-1-like 10 391 IPR044122 -
Vifa4g02411 715 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 210 714 - -
Vifa4g02411 715 Pfam Phosphoenolpyruvate hydrolase-like 447 712 IPR009215 -
Vifa4g02411 715 Gene3D Uncharacterised protein family UPF0261, NC domain 207 395 - -
Vifa4g02411 715 Pfam Uncharacterised protein family (UPF0261) 210 392 IPR044122 -
Vifa4g02411 715 Pfam Uncharacterised protein family (UPF0261) 10 212 IPR044122 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02411 - - gmx:100792647 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02411 4 726878212 726885652 Vifa4g02411 4 726878212 726885652 ECH