Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02395 ATGAGATATTCACGCTTCTTACAATTTTCCCTCTTCCGCAAAACCCTTACCCAAAACCCTAATTTCACTTCTCCTCAAATTTCCAGACCCTACATTGTTTCACAAAATCAACACCAATTCAATCGAAAATCCCAATGCGAATCTACCTCCTTACGCAATTACAACACCGCATCGCCGGATTCCGAGAAGGTGTCCGCGATCGTGGACGAACTCATGGGATTAACGCTACTGGAAGTGATGGACCTCGTTGATGTGATGCGAGAGAAAAAGGGAATCAATGAGCTTCCGATTATGATGTTGATGGTGCCAGGGATGGGAATCAGAGGCATGCCGAAGGGTTTGGGTGGAGCTAAAGGTGGTGGGGGAGAAAAGGGAGAGGAGAAGAAGGTTGAGAAGACAGCGTTTGATGTGAAGCTTGATGGTTTTGATGCTGCGTCGAAGATTAAGATTATAAAGGAAGTTAGGACGTTTACTAGTTTGGGTTTGAAGGAAGCTAAGGATTTGGTGGAGAAAGCGCCGACTCTTTTGAAGAAAGGTGTGACGAAGGAAGAGGCGGAGACTATCATTGCTAAGTTGAAGGAGGTTGGAGCAAAAGCTTCTATGGAATAA 609 0.4516 MRYSRFLQFSLFRKTLTQNPNFTSPQISRPYIVSQNQHQFNRKSQCESTSLRNYNTASPDSEKVSAIVDELMGLTLLEVMDLVDVMREKKGINELPIMMLMVPGMGIRGMPKGLGGAKGGGGEKGEEKKVEKTAFDVKLDGFDAASKIKIIKEVRTFTSLGLKEAKDLVEKAPTLLKKGVTKEEAETIIAKLKEVGAKASME 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02395 202 CDD Ribosomal_L7_L12 62 201 IPR000206 GO:0003735|GO:0005840|GO:0006412
Vifa4g02395 202 Pfam Ribosomal protein L7/L12 dimerisation domain 63 101 IPR008932 GO:0003735|GO:0005840|GO:0006412
Vifa4g02395 202 Pfam Ribosomal protein L7/L12 C-terminal domain 135 201 IPR013823 GO:0003735|GO:0006412
Vifa4g02395 202 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 63 137 IPR036235 GO:0003735|GO:0005840|GO:0006412
Vifa4g02395 202 Hamap 50S ribosomal protein L7/L12 [rplL]. 61 202 IPR000206 GO:0003735|GO:0005840|GO:0006412
Vifa4g02395 202 PANTHER 39S RIBOSOMAL PROTEIN L12 39 202 IPR000206 GO:0003735|GO:0005840|GO:0006412
Vifa4g02395 202 SUPERFAMILY ClpS-like 131 201 IPR014719 -
Vifa4g02395 202 FunFam 50S ribosomal protein L7/L12 131 202 - -
Vifa4g02395 202 Gene3D - 129 201 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02395 Vifa-Chr4 724137484 724138092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02395 K02935 - gmx:100783589 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02395 4 724137484 724138092 Vifa4g02395 4 724137484 724138092 ECH