Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02382 ATGTCCGTCGTTCCCAAACCAGAGAAAACCACCGTCCCTGTCCTCAACGTCGACAGCGACGACGACGCCTCCGCTAGTGCTGTAATGAGCGACGTTCATTTACCACTTCGGCTTCAGGAGCAGCAAAACCCTCCCGAATCAACTTCAACTCCATTAGTCTCTGAAAGCCATAGTTTCTGGAAAGCCGGTGATTATGTTGTTGGTCCTACATCTAAGCCTTCTCCCAGTCAAGGTTACTTGGATCATGCACGAGTTCATCCCAAGTTTCTTCATTCTAATGCGACTTCGCATAAGTGGGCTTTCGGAGCAATTGCTGAGCTAGTGGATAATGCTGTTGATGAGATCCAAAATGGTGCGACTTTTGTTAAGGTTGACAAGCTTAAGAACAAGAAGGACAATTCACCAGTGCTATGCTTTCTAGATGATGGTGGTGGAATGGATCCCAACTCACTACGGAAGTGCATGAGCTTGGGTTATTCTTCAAAGAAGTCGAAGACAACAATTGGACAGTATGGAAATGGATTCAAGACCAGTACTATGAGACTGGGTGCTGATGCTATTGTTTTTAGCCGGGCTACACATTCAGGCCGGCCAACACAAAGTGTAGGTCTACTATCCTATACCTTTTTACGAAAAACCGGGCAAGATGATGTAATCATTCCAATGATAGATTTTGACATATCTGGCCATTGGCCCGAGCCAATTGTTTATGGCTCACTGGACGATTGGTCATCAAACTTGAAAACAATTCTTGATTGGTCTCCCTTCACATCCAAGGACGAGCTCATGCTTCAGTTTGAGGATATAGGATCACATGGTACCAAGATTTTAATATATAATTTGTGGTTGAATGATGAAGGAATATATGAATTGAGTTTTGATGATGATGCTGAGGATATCATGCTGAGAGATGAGGCCAAGCATGGAACTGGGCAGAAGTTGAACAAAAAAGTTGTTCAGCTTCAGTCGCATATTTCTTACCGCATCCGTTACTCTTTACGGGCATATGTTTCACTTTTGTATCTCAGAAAATTTCCGAACTTCAAAATCATACTAAGGGGAAAACCTGTGGACCATGTTGACATTATGGATGACTTAAGACATTCAGAAATTATTAGTTACAAGCCCCAGCTGGCTGCGGCACATGTGGCTACGGTGGAGACGACCATTGGATTTATAAAGGAGTTTCCTGCTATTAATGTTTCTGGGTTTAATGTATACCACAAAAATCGCCTAATCAAGCCTTTTTGGAAAGTAAGCCCAGATGGTTCTTCTAAAGGGAATGGTGTTGTTGGAGTTCTGGAAGCCAATTTTATAGAACCTGCACATGACAAGCAAGATTTTGAGAGATCACTGCTGTTCATACGGCTAGAAGCGAAGCTGAAACAAATGATAAATGATTACTGGAAGGGTCACTGTGAATTAGTTGGATATCAGCCTATAGGTTATAAACCACAAATTCGACAATCAGCTGGGCATTTAACTAATTCACGGGATGAGTCTCTTGCTGATCCACAAGATATTTTCTCAACAGCCAAGCACCAAGTTTTAGAATTAGATCAGCCAAATGAGGGTTTTCTTGCAACCGGCAAGCGGAGTTCGACTCATGAGCAGTGTGGTGTATCGAGTGGAGCTTCAGCGTCCAGATCTATTGATGAAATCTGTGAAGAAAATATCAAACTTTTCACGAGGTGTGAGGAGCACAGGCAAAAAGAAGCAGAGTTGAGAAAGACGGTTGAAGATTTGGAGAAGGAGTTGAAAGAAATCGAATCCAAGCGATCCTATATTGCTTCATTCGTAGAGGCCAAAAAGAAGCTGAAGAATGTATCATGA 1833 0.425 MSVVPKPEKTTVPVLNVDSDDDASASAVMSDVHLPLRLQEQQNPPESTSTPLVSESHSFWKAGDYVVGPTSKPSPSQGYLDHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQNGATFVKVDKLKNKKDNSPVLCFLDDGGGMDPNSLRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRATHSGRPTQSVGLLSYTFLRKTGQDDVIIPMIDFDISGHWPEPIVYGSLDDWSSNLKTILDWSPFTSKDELMLQFEDIGSHGTKILIYNLWLNDEGIYELSFDDDAEDIMLRDEAKHGTGQKLNKKVVQLQSHISYRIRYSLRAYVSLLYLRKFPNFKIILRGKPVDHVDIMDDLRHSEIISYKPQLAAAHVATVETTIGFIKEFPAINVSGFNVYHKNRLIKPFWKVSPDGSSKGNGVVGVLEANFIEPAHDKQDFERSLLFIRLEAKLKQMINDYWKGHCELVGYQPIGYKPQIRQSAGHLTNSRDESLADPQDIFSTAKHQVLELDQPNEGFLATGKRSSTHEQCGVSSGASASRSIDEICEENIKLFTRCEEHRQKEAELRKTVEDLEKELKEIESKRSYIASFVEAKKKLKNVS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02382 610 Coils Coil 565 592 - -
Vifa4g02382 610 Gene3D - 86 279 IPR036890 -
Vifa4g02382 610 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 43 605 IPR045261 GO:0016887
Vifa4g02382 610 FunFam MORC family CW-type zinc finger protein 4 86 287 - -
Vifa4g02382 610 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 102 213 - -
Vifa4g02382 610 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 100 191 IPR036890 -
Vifa4g02382 610 Pfam Morc6 ribosomal protein S5 domain 2-like 331 469 IPR041006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02382 Vifa-Chr4 718894534 718908075 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02382 - - gmx:100781431 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02382 4 718894534 718908075 Vifa4g02382 4 718894534 718908075 ECH