Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02377 ATGGACCCGGTTTCACCTCTCCCTCCTTGGAATTCCGATGACGATTTTCTCCTCAAGAACGCCATTGAGACCGGAGCTTCGCTGGAATCGCTGGCTAAAGGAGTTGTTTCGTTCTCCCGGAGGTATTCACTTAGGGACTTGACGGAACGCTGGCATTCTGTTCTCTATGATTCCCATGTTTCCGATGAAGCTTCTGCTGCCATGAAGAATTTGGAGCTTGCCAAGTCTAATGGCAACGGAACCAAGGAAGTTCTTGCTGCTCCCAAGCGCAAGACTCAGACTATTCGCAAGGTATATAATGCCATGCGGAAGAGACTTCGCACCGAGGTTTTTTTTAATTCTTTTGATATGGCTTTACATGATGACATGTGTATTCAGAAAAACACCAATGGAAATGAAATTGGTGGGTCTGGTAATGTTAGTTGTAGTTTAGATAAGGATGTGAATACAAATTTGCTTGTTGATAGTTTAGTTAAGGAGTGGAATCAATTGGGGTTAGTGAGACCTAGGGCGGGCTCATCTCCTTCAATGAGTGAAGATCTGATTAGGAACACAATTGAGGATGTCCCTGCAACTAACAATGGGCTTCATGTTTCTGAGTCGAAAGAGATGATTCCTCATGTTTCTCATGCTCTCTTGAACTCTCCGAATGGAGACGGGCTTATGTTAATGAATATAGATGAGAAAGATGAGACTAGGGTGGATAAGCAGTCTGATGTTAATGTTGATTCAAATCTTTTGCCTTCTCCTGGTGTTGGTGAGTCTCAGAAGTTGGTTGCAGAAACACAACTTGCTATGGAAAATGGTCCGTCTGCTGTGTTAGAGGTTGTTGCCAACTCGTCAGGCAGCAGTCTTGGTGATGTGGGTTTTGCTTCTAATTGTGAAAATGAAGTACAATCGTCTGGTGCAGCGCAAACATGTCACCCTAAGACTGCAAATGAATTTAGGCTATGTTCATTGAACACTGAGGACCCTAATATCCCTTCCCCGTCTGATGACAGCAACCGTGCAAAAGTATCCGATGTAGTTCCTAATTCTGAAAACATATCCGCCGCTGTAGTGGTTCCTAGTTCTGTAAACATAACCGCTGTAGGTCCTAATTCTGTACACATATCCACTGTATTAGTTCCTAATTTTCCAATTCCGAAACCCATATCAATTGTTAAAAAGGTGGGGTATCCGGATTCCTCTACTACTAATCTAACAAAAAAGGAACCAGAAGAAGGCTTGAAGAGAAAAGACACCCCTTCAAGCTCTTTTGCAGCTTCTCAGTCACTTCGGCCAGGATTAGTGCCGAATATAAATTCAAGCAAGGAAAATTCAGTTGCTGCTGTACCAAAATTTGAAAATCCTGCAACTATGAAGCATGCCTCATATGGACATCCGGCACCAGAGGTAGTTATTGCTCTGCCTTCACCTGTTAGCACTCATCCAAAGGAAGAGGAGCATAAGACTTTTCGTGAGATAGAAGAAAAATTGTTATGCATTGATCAGAAAAAAGGTTATGCTGATGATGATTATGATAGTGATAGCGATGAGGAGCATGAAGTTCCTTACTATTCTGATGCTGAGGGAATGATTCTTGAAATGGATTTAGGTCCAACTGATCAAGATGCAAATGCAAGTACCAAAGTGGTAAGATATCAGAATGATGAAACAAAGAAGACCATCATGAGACTTGAGCAATGTGCCCAGTCTTTTGTGCAAAGAGCCATTGCATCTCGAGGTGCACTTGCAGTGTTTTATGGACGCACTCTGAAGAAATATATCGAAAAATCTGAGGTGATAATTGGCAGATCAACGCCTGATGAAGATGTTGATATTGACTTGGCTAGAGCAGCAAAAGATGCTCACAAGATATCTAGAAGACAAGCTTCAATAAAGATGGACGCAAATGGTTCTTTCACGATCAAAAACCTTGGCAAGAGGACGTTATACTTGAATGGCAAAGAAGTTCCTAAAGGACAAATGCGGGGTCTGAGTGCTGGTAGTTTGATTGAGATTTTGGACTTGTCATTCATCTTTGATGTCAATAAGAAGTGCGTCGAGAGGTTTCTAGGAAATGTGAACGAACAGAACAAGATAGAAGAATGA 2094 0.4202 MDPVSPLPPWNSDDDFLLKNAIETGASLESLAKGVVSFSRRYSLRDLTERWHSVLYDSHVSDEASAAMKNLELAKSNGNGTKEVLAAPKRKTQTIRKVYNAMRKRLRTEVFFNSFDMALHDDMCIQKNTNGNEIGGSGNVSCSLDKDVNTNLLVDSLVKEWNQLGLVRPRAGSSPSMSEDLIRNTIEDVPATNNGLHVSESKEMIPHVSHALLNSPNGDGLMLMNIDEKDETRVDKQSDVNVDSNLLPSPGVGESQKLVAETQLAMENGPSAVLEVVANSSGSSLGDVGFASNCENEVQSSGAAQTCHPKTANEFRLCSLNTEDPNIPSPSDDSNRAKVSDVVPNSENISAAVVVPSSVNITAVGPNSVHISTVLVPNFPIPKPISIVKKVGYPDSSTTNLTKKEPEEGLKRKDTPSSSFAASQSLRPGLVPNINSSKENSVAAVPKFENPATMKHASYGHPAPEVVIALPSPVSTHPKEEEHKTFREIEEKLLCIDQKKGYADDDYDSDSDEEHEVPYYSDAEGMILEMDLGPTDQDANASTKVVRYQNDETKKTIMRLEQCAQSFVQRAIASRGALAVFYGRTLKKYIEKSEVIIGRSTPDEDVDIDLARAAKDAHKISRRQASIKMDANGSFTIKNLGKRTLYLNGKEVPKGQMRGLSAGSLIEILDLSFIFDVNKKCVERFLGNVNEQNKIEE 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02377 697 MobiDBLite consensus disorder prediction 390 435 - -
Vifa4g02377 697 Gene3D - 534 686 - -
Vifa4g02377 697 PANTHER MICROSPHERULE PROTEIN 1 6 692 IPR037912 GO:0002151|GO:0031011|GO:0071339
Vifa4g02377 697 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Vifa4g02377 697 SUPERFAMILY SMAD/FHA domain 586 678 IPR008984 GO:0005515
Vifa4g02377 697 SMART FHA_2 594 652 IPR000253 GO:0005515
Vifa4g02377 697 MobiDBLite consensus disorder prediction 416 435 - -
Vifa4g02377 697 ProSiteProfiles Forkhead-associated (FHA) domain profile. 595 652 IPR000253 GO:0005515
Vifa4g02377 697 Pfam FHA domain 595 668 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02377 Vifa-Chr4 716020938 716024760 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02377 - - mtr:11408169 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02377 4 716020938 716024760 Vifa4g02377 4 716020938 716024760 ECH