Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02303 ATGCCAAAGCGAAACTCCGTCATTGTTCTCTCATCGGATGAGGAACAAGAAACTCCCAAAACTCGTTCATATAGTTCGACCCGCACAAAGCCCAAGCCCAAGGCGAGTTCATCGGGCTCCAGAGGAAGAAAGAAAGCCCGTGTTTCCAGTTCCGGGCCTCGTCTATCTAAGCTTCATGAGATAAACTTGTTTGATGATGATTTCAATGAAGTGTTTACTAGGTCAAAGGTATTCGCTGGTACTCAACAGAACATTGCGGAGGAGCTATGGGTTGATAAATACAAGCCACATTCACTGGAAGAGCTTTCTGTTCACAAGAAAAAAGTTGAAGAAGTTAAGACTTGGTTTGAAGAAAGGTTGAAACCTTCAAAGGGTGTCTACAGAAATAATGTTCTTGTTGTCAGTGGGCAGGCAGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCTTCTCATTTGGGTGCAATGGTATGTGGATGGAACACACCTACACCTGTAATTTGGCAAGAGCATCTTTATAACTCTGGAACAGCGACCAAATACACTTCCAAGTTGGATGAATTTGTTAGTTTTGTTGAGAGAATACGGAAATATGGATTAATACCAACTTCCTTTACCGGGGAATCAAAGCCTTCCGTCATATTTTTAATAGACGATCTTCCCATGATGCATAGTAAAGCTGCTTTAGGAAGGCTTAAAGATTGCTTGCACCTTTTGGTGCACACAACTCAGATACCCACAGCCATATTGGTGACAGATTATGGCAATACTGATTCAGCTGATTATAATGCACGATCCGTTGAAGAACTTAAAATATCTCTAGAACGTTCTGGGGCTTGTAAGGTCACATTCAATCCAATTACAGTTAATTCTATTAAGAAGTTTTTCTGTGTGAACCCAGATCAAGTGCATTCTTTGTCTTTACCAACTCGCACTCCTCACGCATTAAAAGAGAAAAGTAATAAACCTGTTGAGTTAGATGATGGATCTCCCTTGTACTTTGGAAGAGATGAGACAGTATCTTTATTTCACGCCTTAGGGAAATTTTTGCATAATAAGAGGGAGACTGGAGTTGCAGCAGAATATGACCAAAATGGCTTTCTCATGCAAGAAATTTTTTCAAGATTACCTTTAAAAATGGATGTCCCAGAGAAGATTCTTTCTCAAAGCCATGTGCAACCTGGTCCAGTTGCTGATTTTCTGCATGAAAATGTTCTAGATTTTTTGAATGATGAGGCAGTAGAGGATGCATGGATTTTGTCTTCATATCTAGGTGATTCTGACATTCTTCTTGCTAAGCTTCGGGGTATGCTATCTAGTCATAATGAGGCAGAGAGTATTTTACAGTCAGCTGCTGCGTCAATTGCTGTTCGTGGGGTGCTGTTTGGAAATTCTCAGCCAATTTCTTCCAGGTGGCATGCAATTCGACGACCAAAACTCTGGCAGGTTCAGAAAGAATCATCATACCACAAGAATGAGATGTTTAGGCAGAGAATCCCGGCTTGTAATCAGCTGAGTTCTTATCATATGTCAGTTATGGCCACAGAATACATGCCTATGTTTAAATTGCTTGGAAATAGGGTTGGCAGTGCATATAATGAACTAGATCAGGAATCAGCGCAGAACTTGGATATGGAAGATTTTGATACTGACAAAATGAGTTTAGATGGTGAAGCAATGGAGATTTCCGATGATGACATAGAAGACTGGTAG 1713 0.4057 MPKRNSVIVLSSDEEQETPKTRSYSSTRTKPKPKASSSGSRGRKKARVSSSGPRLSKLHEINLFDDDFNEVFTRSKVFAGTQQNIAEELWVDKYKPHSLEELSVHKKKVEEVKTWFEERLKPSKGVYRNNVLVVSGQAGVGKSAAIHVIASHLGAMVCGWNTPTPVIWQEHLYNSGTATKYTSKLDEFVSFVERIRKYGLIPTSFTGESKPSVIFLIDDLPMMHSKAALGRLKDCLHLLVHTTQIPTAILVTDYGNTDSADYNARSVEELKISLERSGACKVTFNPITVNSIKKFFCVNPDQVHSLSLPTRTPHALKEKSNKPVELDDGSPLYFGRDETVSLFHALGKFLHNKRETGVAAEYDQNGFLMQEIFSRLPLKMDVPEKILSQSHVQPGPVADFLHENVLDFLNDEAVEDAWILSSYLGDSDILLAKLRGMLSSHNEAESILQSAAASIAVRGVLFGNSQPISSRWHAIRRPKLWQVQKESSYHKNEMFRQRIPACNQLSSYHMSVMATEYMPMFKLLGNRVGSAYNELDQESAQNLDMEDFDTDKMSLDGEAMEISDDDIEDW 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02303 570 Gene3D - 87 267 IPR027417 -
Vifa4g02303 570 MobiDBLite consensus disorder prediction 1 53 - -
Vifa4g02303 570 Pfam Rad17 P-loop domain 87 262 - -
Vifa4g02303 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 296 IPR027417 -
Vifa4g02303 570 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 80 297 IPR004582 GO:0006281
Vifa4g02303 570 FunFam RAD17 checkpoint clamp loader component 87 267 - -
Vifa4g02303 570 MobiDBLite consensus disorder prediction 22 36 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02303 K06662 - gmx:100799826 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02303 4 695227109 695232914 Vifa4g02303 4 695227109 695232914 ECH