Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01999 ATGGAAACAACACTCATGTGCTTTCTTTATTATTTGTTCATAATATTTTGTTACTACTTTGCCAATTCTGTACGTGCTATTGAATCACCAAAGTATACAGTAATACAATCAGAATCAGATTTTCAGATCAGACTCTACAATGAATCCTCATGGATCTCTGCTCCATCTTCCAGAACTAATTCCTTCGAGAAGTCCACCAAAGCCGGATTTCAGAGGTTGTACCAATATATTCACGGAGCGAATTTAAATTCTTCCAAATTTGCAATCACTGCTCCAATCTTAACAAGAATTCCTTCATCAATATCTTCTGAGGTTGGCTATAGTGTAAGAATGTATTTATCACCTCACTTTCAAGGGAAGCCTCCACAGCCTAATCCCGAACTGAAGTTGCAACTTGAGAAATGGAAATCTCAATGCATAGCAGTTAGAAAATTCAGTGGATATGCAAAGGATGATAACATTAACAAAGAAATTGAAGCTCTGGTTAGTAGTTTAAACAAGTGGCTAGATAAAACTTCAGAAATAGTACATGATGCAAGCTCGTATACCGTTGCTCAATACAATGCTTCCTTTCGTAGTACTGAGCGGGTAAATGAAGTGTGGATAAATGTGTCAGGATTTAGAAGTGACTGCTGA 636 0.3695 METTLMCFLYYLFIIFCYYFANSVRAIESPKYTVIQSESDFQIRLYNESSWISAPSSRTNSFEKSTKAGFQRLYQYIHGANLNSSKFAITAPILTRIPSSISSEVGYSVRMYLSPHFQGKPPQPNPELKLQLEKWKSQCIAVRKFSGYAKDDNINKEIEALVSSLNKWLDKTSEIVHDASSYTVAQYNASFRSTERVNEVWINVSGFRSDC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01999 211 Pfam SOUL heme-binding protein 27 202 IPR006917 -
Vifa4g01999 211 FunFam Heme-binding protein 2 27 209 - -
Vifa4g01999 211 Gene3D Regulatory factor, effector binding domain 26 208 IPR011256 -
Vifa4g01999 211 PANTHER HEME-BINDING PROTEIN-RELATED 23 206 IPR006917 -
Vifa4g01999 211 SUPERFAMILY Probable bacterial effector-binding domain 17 204 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01999 Vifa-Chr4 584323648 584324464 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01999 - - psat:127074926 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01999 4 584323648 584324464 Vifa4g01999 4 584323648 584324464 ECH