Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01998 ATGAACCTTCTCATCGCTCTCTGTTTATCTTCTTCGCATATGAAGCGAATCAACCGCTATCGTTCATCGACACACACTCCAAAGCTCAACGTAGTAGATATTTCCATTTTCCACTCCAATTCTCGCGAGATTCGCGATTCTTCCAATCTCGCCCATTCCACCGATTCAGCAAAGAAGAAAGAAAAAGCAAGTGGATCCATCAAAATGAGCCATAGCATCTTTCACCAAACTTTGTTGTGTCAAACGCAATCGGTTGCTGAGTATCAAAGTAAGGTTAATTCTCGTGGAATTGTTTCCGGTACTTTATTCCAATCGCAGAGTGTTGATAAAGAAAAGAAGCTTTTACTGTCTACAAATTTCCGCGGGAATAGGTTGTGTGTTAGGAAACGCAGAGTAGCCATGGGGAAGAACCAGTCTATTTCACGCGCTGTGTTGACATCAAATGCGGCTTCTGAGCTTTCAGAGAAGTTCAACCTGGATGGAAATATTGAATTGCAGGTCAATCTTAGTTCTTCAGGATCAGGAGGTGCAACACAAGTAGATGTTCAGGTTTCAAATAGTAGGGGCTCTATGGTCTTACATTGGGGAATTATATGTGAAAGTAAAGGGAAGTGGGTACTTCCTTCTCGTCGCCCAAATGGAACTCAAGTTTATAAGAATAGAGCTCTCAGAACTGCTTTTGTAAAATCTGGCTCAGGATCCTCAGTTAGGATTGAAATTGATGATCCTGCTGCACAAGCCATCGAGTTCCTTGTAATTGACGAATCTCAGAATAAGTGGTATAAAAACCACGGTGATAACTTTCACATCAAGTTACCAGTAAAAGATAAGCCAGTTCTGCAAGTTTCCGTTCCCGAAGACCTTGTACAAATTCAAGCATACATTAGGTGGGAGCGAAAGGGTAAGCAGTCATACAGCCCAGAGCAAGAGAAGGAGGAATATGAAGCGGCCCGGCGCGAGTTATTAGAGGAAGTAGCTAGGGGTACCTCTGTACTAGATATTCGTGCAAGGTTGACTAACAAAACTAGTGATGTTGAAGTAAAGGAGCCTAACAAACCTAATGCTGCTGAAGTAAAGGAGCCTTCTCTTTCGAAAACAAAGACCATCCCTGATGAACTTGTACAGATTCAAGCATTTATACGCTGGGAAAAAGCTGGGAAGCCAAATTATTCTCCCGAACAACAACTTATTGAATTTGAGGAAGCACGAAAAGAATTGCTATCTGAGCTTGAGAAGGGTGCTTCGGTGGATGAGATACGTAGGAAGATAACCAAAGGAGAGATACAAACTAAAGTTTCCAAGCAATTGAAAACCAAACAATACTTCCAAGCTGAAAGAATACAAAGGAAAAAAAGAGATTTGACGCAGCTTATTAACAGTAATGCTGCTAAAAACGCAGACCAGCAACTTGTAGAAGTAGACCAACAATTTGTAGATGCTCCAAAGACTTTGTCAGTAATTGAAAGATATGCCAAGGAAAGGGAAGAATATGATACTGGAAGTGTTTTGAATAAAAAAACTTATAAGCTTGCTGATAAGGATCTTTTGGTCCTCATTACCAAAGATGGTGGTAAGATTAAGGTTCACCTGGCTACAGACTACAAAATACCTGTTACACTTCACTGGGCCTTATCTAAAACAACCCCTGGAGAATGGTTGGTACCACCAGAAAGTTCTCTACCCCCAGGGTCTGTTATTATGGATAAGGCTGTAGAAACTCCTTTTAAAGCTGGTTCTTCCTCTGATCCTTCTCCCGAGGTCCAGTCCTTAGATATAGAGGTCAATGATGATACATATAAAGGATTAACTTTTGTCATTCTATCAGACGGAAAGTGGTTCAAGAACAGTGGATCAGATTTTTGTATTGAATTTGGTGGGAAGAAGCAGATACAAAAGGATTTTGGTGATGGCAAAGGTACAGCTAAGTTTTTGCTGGATAAAATAGCAGAAATGGAAAGTGAGGCACAAAAGTCCTTTATGCATAGATTTAATATTGCAGCAGATTTGATAGATCAAGCCAAAAATGCTGGTCAATTGGGTCTTGCGGGTATTTTGGTGTGGATGAGATTTATGGCTACGAGACAGCTCATATGGAACAAAAATTACAATGTCAAACCACGTGAGATAAGTAAAGCCCAGGATAGGCTTACAGAGTTGCTCCAGAATGTTTATGCAAGTTATCCACAGTACAGGGAAGTTGTTAGGATGATCCTTTCAACTGTTGGTCGTGGAGGTGAAGGTGATGTGGGACAGCGTATTCGAGATGAAATCCTTGTCATCCAGAGAAATAACGATTGCAAGGGTGGAATCATGGAGGAATGGCACCAGAAGTTACACAATAATACTAGCCCCGATGATGTTGTGATCTGTCAGGCACTAATTGATTATATAAATAGCGACTTTGATATTGGTGTTTATTGGAAAACATTGAATGACAATGGAATAACAAAAGAACGTCTTCTAAGCTATGACCGTGCCATCCATTCTGAACCCAATTTTCGGAGAGATCAGAAGGAAGGTCTTTTGAGAGATCTGGGACACTACATGAGGACGTTGAAGGCAGTTCATTCAGGTGCAGATCTTGAATCTGCTATTTCAAATTGCTTAGGCTACAAAACTGAGGGTCAGGGCTTCATGGTTGGGGTGCAGATAAATCCGGTTCCTGGTTTGCCATCTGGTTTTTCTGAACTAGTTCGGTTTGTCATGGAACATGTTGAAGAAAGAAATGTTGAACCGCTACTTGAGGGTTTGCTAGAAGCTCGTCAGGAATTAAGACCATTACTCAATAAGTCCCAAAGTCGCTTGAAAGATCTTTTATTTTTGGATATTGCCCTTGATTCTGCGGTTAGAACAGCAGTGGAAAGGGGATACGAGGAATTAAACAATGCTGGACCTGAGAAAATAATGTACTTTATCTGCTTGGTTCTCGAAAACCTTGCACTTTCATCGGATGACAACGAAGATCTCATCTACTGTTTGAAGGGATGGAATCTTGCCTTAAGCATGTGTAAGGGTAAAGACACTCATTGGGCATTGTATGCAAAGTCAGTCCTTGACAGAACACGCCTTGCACTCACAAATAAGGCAGAGTCATACCAGAAAATTCTTCAGCCGTCGGCAGAATATCTTGGATCATCACTTGGTGTGGAAAATTGGGCTGTGGAAATATTTACTGAAGAGATTATCCGTGCTGGATCTGCGGCTTCTTTGTCTACTCTTGTAAATCGACTAGATCCTGTACTCCGAAAGACTGCTAATCTTGGAAGTTGGCAGGTTATTAGCCCAGTTGAAACCATTGGATATGTCGAGGTTGTGGATGAGTTGCTCGCCGTTCAAAACAAATCATATGAGCGACCTACAATTTTGATAGCCAAGAGCGTGAAGGGAGAGGAAGAAATTCCAGATGGTACAGTTGCTGTCCTGACACCTGATATGCCAGATGTCCTATCTCATGTATCTGTACGAGCAAGAAATAGCAAGGTGTGTTTTGCGACATGTTTTGATCCCAATATCTTTGCTGACCTCCAAGCAAAAAAAGGAAAGCTCTTGCGCTTGAAGCCTACATCTGCTGAGGTAGTTTACAGTCAGGCCAAGGAGGGTGAGAGTATAAATGAGAAATCAATCGACCTGAAAGAAGTTGGTTCTGTTCCACCTTTATCTTTGGTCAGAAAGCAGTTCAGTGGTAGATATGCAATCTCATCTGAAGAATTCACCGGGGAAATGGTTGGAGCTAAATCTCGCAATATCTCTTACTTAAAAGGAAAGGTTCCTTCCTGGGTTGGAATTCCTACCTCGGTAGCCATACCGTTTGGAGTTTTTGAACATGTTCTCTCTGAGAAGTCAAATCAGGTTGTGGCTGAGAAGATCAATATTTTAAAAAAGAAGTTAATTGAAGGAGACTTCAGTGCCCTCAAGGAGATCCGTGAAACAGTTTTACAGTTGAATGCACCACCCAAGCTGGTAGAGGAGTTGAAAACTACGATGAAGGGTTCGGGGATGCCTTGGCCGGGTGATGAAGGTGAAAAACGCTGGGGACAGGCATGGACGGCTATAAAAAAAGTGTGGGGCTCAAAGTGGAACGAAAGAGCATACTTCAGCACAAGAAAAGTGAAACTGGACCACGATTATCTTTCCATGTCCGTCCTTGTCCAGGAAGTGATTAATGCTGACTATGCTTTTGTCATCCATACAACTAATCCGACCTCTGGAGACTCTTCAGAAATATATACCGAGGTTGTAAAGGGACTAGGTGAAACACTAGTTGGAGCTTATCCCGGCCGTGCTTTGAGTTTCATCTGCAAAAAAAGTGATTTGAATTCTCCTCAGGTCTTGGGTTATCCTAGCAAACCAATTGGGCTATTTATAAGAAGGTCAATAATTTTTCGATCTGATTCCAATGGCGAAGATCTTGAAGGGTATGCTGGTGCTGGTCTTTATGACAGTGTGCCAATGGATGAAGAAGATGAAGTGGTGCTCGACTACTCGTCAGATCCACTGATGATTGATGCTAGTTTCCGCCAGAAAATCTTGTCAAGCATTGCCAGTGCAGGAAATGCAATTGAAGAGTTGTATGGCACTCCTCAGGACATAGAAGGTGTCATCAAAGATGGAAAAGTCTATGTTGTTCAGACCAGACCGCAAGTGTAG 4647 0.419 MNLLIALCLSSSHMKRINRYRSSTHTPKLNVVDISIFHSNSREIRDSSNLAHSTDSAKKKEKASGSIKMSHSIFHQTLLCQTQSVAEYQSKVNSRGIVSGTLFQSQSVDKEKKLLLSTNFRGNRLCVRKRRVAMGKNQSISRAVLTSNAASELSEKFNLDGNIELQVNLSSSGSGGATQVDVQVSNSRGSMVLHWGIICESKGKWVLPSRRPNGTQVYKNRALRTAFVKSGSGSSVRIEIDDPAAQAIEFLVIDESQNKWYKNHGDNFHIKLPVKDKPVLQVSVPEDLVQIQAYIRWERKGKQSYSPEQEKEEYEAARRELLEEVARGTSVLDIRARLTNKTSDVEVKEPNKPNAAEVKEPSLSKTKTIPDELVQIQAFIRWEKAGKPNYSPEQQLIEFEEARKELLSELEKGASVDEIRRKITKGEIQTKVSKQLKTKQYFQAERIQRKKRDLTQLINSNAAKNADQQLVEVDQQFVDAPKTLSVIERYAKEREEYDTGSVLNKKTYKLADKDLLVLITKDGGKIKVHLATDYKIPVTLHWALSKTTPGEWLVPPESSLPPGSVIMDKAVETPFKAGSSSDPSPEVQSLDIEVNDDTYKGLTFVILSDGKWFKNSGSDFCIEFGGKKQIQKDFGDGKGTAKFLLDKIAEMESEAQKSFMHRFNIAADLIDQAKNAGQLGLAGILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTELLQNVYASYPQYREVVRMILSTVGRGGEGDVGQRIRDEILVIQRNNDCKGGIMEEWHQKLHNNTSPDDVVICQALIDYINSDFDIGVYWKTLNDNGITKERLLSYDRAIHSEPNFRRDQKEGLLRDLGHYMRTLKAVHSGADLESAISNCLGYKTEGQGFMVGVQINPVPGLPSGFSELVRFVMEHVEERNVEPLLEGLLEARQELRPLLNKSQSRLKDLLFLDIALDSAVRTAVERGYEELNNAGPEKIMYFICLVLENLALSSDDNEDLIYCLKGWNLALSMCKGKDTHWALYAKSVLDRTRLALTNKAESYQKILQPSAEYLGSSLGVENWAVEIFTEEIIRAGSAASLSTLVNRLDPVLRKTANLGSWQVISPVETIGYVEVVDELLAVQNKSYERPTILIAKSVKGEEEIPDGTVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPNIFADLQAKKGKLLRLKPTSAEVVYSQAKEGESINEKSIDLKEVGSVPPLSLVRKQFSGRYAISSEEFTGEMVGAKSRNISYLKGKVPSWVGIPTSVAIPFGVFEHVLSEKSNQVVAEKINILKKKLIEGDFSALKEIRETVLQLNAPPKLVEELKTTMKGSGMPWPGDEGEKRWGQAWTAIKKVWGSKWNERAYFSTRKVKLDHDYLSMSVLVQEVINADYAFVIHTTNPTSGDSSEIYTEVVKGLGETLVGAYPGRALSFICKKSDLNSPQVLGYPSKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEDEVVLDYSSDPLMIDASFRQKILSSIASAGNAIEELYGTPQDIEGVIKDGKVYVVQTRPQV 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01998 1548 Gene3D - 1388 1547 - -
Vifa4g01998 1548 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 131 357 - -
Vifa4g01998 1548 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1240 1547 - -
Vifa4g01998 1548 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1348 1547 IPR002192 GO:0005524|GO:0016301|GO:0016310
Vifa4g01998 1548 Gene3D - 1337 1387 IPR013815 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01998 540 622 Glycoside Hydrolase AT1G69830 39.326 7.64e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01998 K08244 - gmx:100802675 2388.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01998 4 583721493 583752176 Vifa4g01998 4 583721493 583752176 ECH