Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01985 ATGGTAATCGTTGCATTATCATCTTCCCTATTCTCCTCCTTACCTCCCCACGACCCCACTCCTTCCTCATCCGCCCCCCCACGTCCGCCTATCCCCATTCCCAAGTACCCCCCACCTCGAAAATCCCAACCCCCACCACCACCATCAAATCCCGCCCTCAAATACCACCGCAACTCCAAATACTACAAACCCATCCACCACAACACCGTCATCCCCTCCGACGGCGACCGCTCCGTCATCATCGGAGAATCCGGCGTCTCCTACCTCCTCCCCGGCGCCCCATTCGAGTTCCAGTTTAGCTACTCAGAAACTCCCAAAGTGAAACCCTTGGCCATCCGTGAACCGGCTTTCCTACCGTTTGAGCCTCCGACAATGCCGAGGCCGTGGACCGGGAAAGCGCCGTTGAAGAAGTCGAAGAAGAATATTCCGCTTTTTGATTCGTTTAATCCTCCGCCTCCTGGGATGAAAGGTGTTAAGCAAGTTGAAATGCCGGGGCCTTTTCCGATTGGGAAGTATCCGGAAGAGGGAATAAGTAGAGAGGAGATACTCGGGGAGCCTCTTAAGAAGTGGGAGATACAGATGCTTGTTAAGCCTATGGCGTCTGATAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACGCACAACATGTTGGAGTTGATACATTCTCATTGGAAGCGTCGTCGCGTCTGTAAAGTTCGTTGTAAAGGTGTTCCCACGGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAGCAGGAGGGAAAATAATTCATCGAGTTGGTGGCATAGTTTATCTTTTCCGTGGAAGAAATTACAACTACCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTATATCCAAAACTTATACAAGATGCTCCAGAAGGATTAACAAAAGCTGAAGCAGATAAATTACGGAAGAAAGGGAAAAGTCTGTTGCCAATATGTAAATTAGCCAAAAATGGAGTATACACAACACTTGTAAAGGATGTAAGAGATGCTTTTGAAGGAAGCCATTTGGTGAAGATTGACTGCAAAGGATTGGATCCTAGTGATTACAAGAAATTAGGTGCCAAGCTGAAGGATTTGGTTCCTTGTGTGCTATTGTCTTTTGATGATGAACAAGTATTGATTTGGAGGGGCAAAGACTGGAAATCAATGTACGCAAAAGCTCCAGTTTTCGTTACAAGGAATTTGGACAATACAGGCATGGGCAACACGGTCAACTCAAGCCCAAAAATGTTATCTCTGTGGAAGAGTGCGATTGAGTCGAACAAAGCTTTGTTGCTAGAAGAATTTAATCTTGGACCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAGGGTATTTCACAGGCCACAGAGCACTCCCATCCAGCATTTATTTCTTCCAGTGAAGATGCTTTTGAAGGTTCAATTGAAGAAGGTGGTACAGAAGACAACTATTCAAATGAAGAAGGCCTAGATGATGTTGATGATTATGATAGCAACAATGATGATGAAGATGATTATGATTACTACAACGATGACGAACACGATGAGTTTAACGATATAGTGGTTACATCTGCTCAACCTGGATCGCTGCCAATTGATTCGCTTGTTGATAAGCTCAAACTAAGACAAAAGGAGTAA 1656 0.4553 MVIVALSSSLFSSLPPHDPTPSSSAPPRPPIPIPKYPPPRKSQPPPPPSNPALKYHRNSKYYKPIHHNTVIPSDGDRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPGMKGVKQVEMPGPFPIGKYPEEGISREEILGEPLKKWEIQMLVKPMASDNRQVNLGRDGLTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDNVCRHIEEKAGGKIIHRVGGIVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADKLRKKGKSLLPICKLAKNGVYTTLVKDVRDAFEGSHLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQVLIWRGKDWKSMYAKAPVFVTRNLDNTGMGNTVNSSPKMLSLWKSAIESNKALLLEEFNLGPDALLEKVEEFEGISQATEHSHPAFISSSEDAFEGSIEEGGTEDNYSNEEGLDDVDDYDSNNDDEDDYDYYNDDEHDEFNDIVVTSAQPGSLPIDSLVDKLKLRQKE 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01985 551 MobiDBLite consensus disorder prediction 487 520 - -
Vifa4g01985 551 Gene3D - 305 400 IPR035920 -
Vifa4g01985 551 MobiDBLite consensus disorder prediction 476 520 - -
Vifa4g01985 551 ProSiteProfiles CRM domain profile. 303 399 IPR001890 GO:0003723
Vifa4g01985 551 FunFam CRS2-associated factor 1, chloroplastic 186 281 - -
Vifa4g01985 551 SUPERFAMILY YhbY-like 305 396 IPR035920 -
Vifa4g01985 551 FunFam CRS2-associated factor 1, chloroplastic 304 399 - -
Vifa4g01985 551 MobiDBLite consensus disorder prediction 11 55 - -
Vifa4g01985 551 SUPERFAMILY YhbY-like 186 280 IPR035920 -
Vifa4g01985 551 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 41 544 IPR044599 GO:0000373
Vifa4g01985 551 SMART CRS1_YhbY_2 305 388 IPR001890 GO:0003723
Vifa4g01985 551 SMART CRS1_YhbY_2 187 270 IPR001890 GO:0003723
Vifa4g01985 551 Gene3D - 186 282 IPR035920 -
Vifa4g01985 551 MobiDBLite consensus disorder prediction 19 52 - -
Vifa4g01985 551 Pfam CRS1 / YhbY (CRM) domain 305 388 IPR001890 GO:0003723
Vifa4g01985 551 Pfam CRS1 / YhbY (CRM) domain 190 270 IPR001890 GO:0003723
Vifa4g01985 551 ProSiteProfiles CRM domain profile. 185 281 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01985 Vifa-Chr4 579915168 579920302 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01985 - - gmx:100801953 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01985 4 579915168 579920302 Vifa4g01985 4 579915168 579920302 ECH