Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01884 ATGGCATTGAGCAACAATGTCATAGGAATCATAAACTTCATTGCAGTACTCCTCTCAATCCCTATCATAGGTGCTGGAATTTGGCTAACAACTTTACAAGCAGAATCATGTGTCAAAATCCTACAATGGCCAGTGATCATTTTAGGGATACTAATTTTCATTGTTGCTATGGTAGGCTTGGTTGGAGCCTTTTGGAGGATACCAATGCTTCTTATATTCTACCTTATTGCAATGATTGTGCTCATTGTATTGTTGGTTTCTTTGGTTATTTTTGTTTATTTTGTCACACTTAGAGGACATGGAAATATTGAACCTAATAGGTCATATTTGGAGTATCGCGTGGATGATTTTTCAATTTGGTTGCGTAGAAGGGTTAGAAGTTCACGTAAATGGGATGGAATAAAGAGTTGTCTTAGTTCATCGAGTATTTGTGCTGAGTTGAATCAAAGTTATCGATTACCTCAAGATTTCTTTAATGCACACCTATCACCCTTGCAGTCAGGGTGTTGCAAACCGCCAACAAAATGTGGCTACACATTTGTGAACCCAACTTATTGGATTAGTCCAATCAACAATGGTGAAGATAATGATTGCATGAAATGGAGCAATGATCAAACACAACTTTGCTACAATTGTGACTCATGCAAAGCTGGTTTATTAGCAACACTTAGAAAAGAGTGGAGAAAAGCCAATGTGATATTGATTGTTACATTGGTTGGTTTAATTGTTCTGTATTTGTTTGCTTGTTTTGCCTTTAGGAATGCCAAAACTGAGGATCTTTTTCGCAAATACAAGCAAGGCTACACTTGA 810 0.3704 MALSNNVIGIINFIAVLLSIPIIGAGIWLTTLQAESCVKILQWPVIILGILIFIVAMVGLVGAFWRIPMLLIFYLIAMIVLIVLLVSLVIFVYFVTLRGHGNIEPNRSYLEYRVDDFSIWLRRRVRSSRKWDGIKSCLSSSSICAELNQSYRLPQDFFNAHLSPLQSGCCKPPTKCGYTFVNPTYWISPINNGEDNDCMKWSNDQTQLCYNCDSCKAGLLATLRKEWRKANVILIVTLVGLIVLYLFACFAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01884 269 PRINTS Transmembrane four family signature 6 29 - -
Vifa4g01884 269 PRINTS Transmembrane four family signature 38 64 - -
Vifa4g01884 269 PRINTS Transmembrane four family signature 65 93 - -
Vifa4g01884 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
Vifa4g01884 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01884 Vifa-Chr4 529627399 529628734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01884 1 269 Miscellaneous Gene Families AT5G46700 66.914 2.71e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01884 - - gmx:100789266 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01884 4 529627399 529628734 Vifa4g01884 4 529627399 529628734 ECH