Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01877 ATGGCTGACAAGAAATCCGGCACCATCGGTTACGCGTTAGCGCCCAAGAAACAGAACAGCTTCATCCGCGACTCACTCCTAACGCTCGCCAAATCCCGCGGAATCGAACTCGTCCGAGTCGTCTCTGACCGTCCTCTAGCAGATCAAGGTCCCTTCGATTGCATCCTCCACAAACTCTACGGCGACGACTGGAAACGCCAGCTTCAAGATTTTCAATCAAGAAACCCTAATGCGGTGATTCTTGACGCTCCCGAAGCGATTGAGAGGCTCCACAACAGAATCTCAATGCTTCAGGTTGTTTCCGAGCTTAGGGTTGACGACCGAACCGAGACGTTCGGGATCCCGAAGCAGATTGTGATTTACGATAAAGAAACTCTCTCTGACGGACAGGCGTGGGAGAGTTTGAAGTTTCCGGTGATAGCGAAACCGCTTGTGGCTGACGGTAGTGCGAAATCGCATAAAATGGCTTTGGTTTTTAGCCACGGCGCGCTGAATAAGCTGAAGCCTCCGATTGTTTTGCAGGAGTTTGTTAATCACGGTGGGGTGATTTTCAAAGTGTATGTTGTTGGTGAGAGGGTTCGTTGTGTGAAGAGGAAGTCTCTGCCTGATGTTTCAGAGGAGAAGGTTTTGGGGGTCTCGGAAGATTTGTTGTCCTTTTCGCAGATTTCGAATCTGGCGAACCGGGATAGTGTGAATGATGATGAGAAGTTTTATCAGATGATGAGTTTGGATGATACTACTGAGATGCCACCACAGGCTTTTATTGTTGATATTGCTAGTGGGTTGAGGAAGGCTATGAAGCTGAATCTGTTCAACTTCGATGTGATTCGTGATTCTAGATATGGAAATAGGTATCTTATTATTGATATCAATTACTTTCCTGGTTATGCTAAAATGCCGGGTTATGAGAAAGTTTTAACTGATTTTTTCTGCGATTTGATACACAAGAAGGATGTTGATGATACAAATGTGAAAGAGAATGAGGTTGTTGCTGATGGTGACAAGGGCAATGCTGTGGTTTTAACTGATGAAATAGATAAGTCTAAGTCTGTTACAGTACAAAAATGA 1068 0.4513 MADKKSGTIGYALAPKKQNSFIRDSLLTLAKSRGIELVRVVSDRPLADQGPFDCILHKLYGDDWKRQLQDFQSRNPNAVILDAPEAIERLHNRISMLQVVSELRVDDRTETFGIPKQIVIYDKETLSDGQAWESLKFPVIAKPLVADGSAKSHKMALVFSHGALNKLKPPIVLQEFVNHGGVIFKVYVVGERVRCVKRKSLPDVSEEKVLGVSEDLLSFSQISNLANRDSVNDDEKFYQMMSLDDTTEMPPQAFIVDIASGLRKAMKLNLFNFDVIRDSRYGNRYLIIDINYFPGYAKMPGYEKVLTDFFCDLIHKKDVDDTNVKENEVVADGDKGNAVVLTDEIDKSKSVTVQK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01877 355 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 4 318 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vifa4g01877 355 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 9 87 IPR041429 -
Vifa4g01877 355 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 84 297 - -
Vifa4g01877 355 FunFam Inositol-tetrakisphosphate 1-kinase 117 216 - -
Vifa4g01877 355 PIRSF ITPK 1 326 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vifa4g01877 355 FunFam Inositol-tetrakisphosphate 1-kinase 83 295 - -
Vifa4g01877 355 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 108 311 IPR040464 -
Vifa4g01877 355 ProSiteProfiles ATP-grasp fold profile. 104 319 IPR011761 GO:0005524|GO:0046872
Vifa4g01877 355 Gene3D - 85 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01877 Vifa-Chr4 529306839 529307906 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01877 K00913 - gmx:100127430 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01877 4 529306839 529307906 Vifa4g01877 4 529306839 529307906 ECH