Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01802 ATGAAGAATTGGATGAGCATAGTGGCTATGGGTGCAGTAACAAACTCCACATTTCTTCTATTTTCACCACCCATTCTCAAACCCATCATCCCCTTTTCTCTCACCAAAACCTCGCCGTATCTCATTTCTCTCACCACTCCATCTCGCCGCTTCATTTCCGCTCCTTCCCTTCCTTCGGTTGTCTCCGCTGACCACACCTTCAACTTCTCTGATTCCGGAGATGGAAACGGCGTTGCGGTTTCAAGGAGAGGTGATAAAGTGCTTCTTAAAGGGATGACTTACTCTGAACTTGAAAAATGGGTTCAATCACATGGATACAGACCAGGACAGGCTATGATGTTATGGAAGCGTATGTATGGAAACAATATTTGGGCGCATCATACTGATGAGTTGGAAGGTTTGAACAAAGATTTCAAGAAGATGTTGAGTAAAAATGCAGATTTCAAGGCTCTTGCTGTGAAAGAAATTCACACGGCCTCTGATGGAACTAGGAAGATTTTATTCACTTTGGATGATGGGCTGGTCATAGAAACAGTTGTCATACCTTGTGAAACTGGCAGGACTACGGTGTGTGTTTCCAGTCAAGTTGGATGTGCCATGAATTGTCAATTTTGCTATACTGGAAGAATGGGTCTTAAGAGACATCTTACTGCTGCAGAAATAGTTGAGCAGGCCGTTTTTGCCAGACGGCTTTTCACAAATATTATGGTGGATGATCAAGGGCTTCAATTCAGCCCCCGCAAGGTCACTGTTTCAACCAGTGGGCTTGTTCCGCAGCTCAGACGTTTCCTTCATGAATCGAACTGCACGCTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTAAGAAACTGGATCATGCCTATAAATCGAAAGTATAAACTGGACTTGCTTCTTGAGACGCTTCGGGAGGAGCTCTGCTTGAAACACAAATATAAGGTTCTATTTGAGTATGTGATGCTTGAAGGAGTTAATGACAGCAATGAAGATGCAAAAAGGCTTATCGAGCTTGTAAAGGGCATCCCTTGCAAGATCAATCTCATCTCTTTCAATCCGCATAGTGGATCCTTCTTCAGACCAACTAAAGATGAAAGAATGATTGAATTCAGAAACATGCTAGCTGAGGCAGGATGCGTAGTCCTTTTAAGAACCAGTAGAGGCGATGATCAAATGGCTGCGTGTGGTCAGCTAGGCAATCCAGGCACCATCCAAGCTCCGATGCTCCGTGTACCTAAACAATTCCAAACAGCAGTTGGAAGTTCAACGTGA 1269 0.4397 MKNWMSIVAMGAVTNSTFLLFSPPILKPIIPFSLTKTSPYLISLTTPSRRFISAPSLPSVVSADHTFNFSDSGDGNGVAVSRRGDKVLLKGMTYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSKNADFKALAVKEIHTASDGTRKILFTLDDGLVIETVVIPCETGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTNIMVDDQGLQFSPRKVTVSTSGLVPQLRRFLHESNCTLAVSLNATTDEVRNWIMPINRKYKLDLLLETLREELCLKHKYKVLFEYVMLEGVNDSNEDAKRLIELVKGIPCKINLISFNPHSGSFFRPTKDERMIEFRNMLAEAGCVVLLRTSRGDDQMAACGQLGNPGTIQAPMLRVPKQFQTAVGSST 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01802 422 Gene3D - 86 148 - -
Vifa4g01802 422 FunFam Radical SAM superfamily protein 86 149 - -
Vifa4g01802 422 Gene3D Aldolase class I 233 403 IPR013785 -
Vifa4g01802 422 Gene3D Aldolase class I 150 232 IPR013785 -
Vifa4g01802 422 SUPERFAMILY Radical SAM enzymes 187 376 - -
Vifa4g01802 422 PANTHER 23S RRNA METHYLTRANSFERASE 234 405 IPR040072 -
Vifa4g01802 422 ProSiteProfiles Radical SAM core domain profile. 184 389 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01802 Vifa-Chr4 511045244 511048402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01802 K06941 K22544 gmx:100813692 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01802 4 511045244 511048402 Vifa4g01802 4 511045244 511048402 ECH