Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01801 ATGGAGAAGCAACAACAGCAGAAACTTCCTCTTTCTCTTGACTGGGACACGCTCCATGATACGCCGCCGGCGGAACTCGTCGTGAAGCCGTCTGCTAAGGCTCCCGATCAGAAACCTCCGCCGTACGTTGACCTGGAAGGTCTCAAAGATAGTGAGCTCGAGGACGACATTCGGAGGAAGAAGACGCTTCTCGAAACCAGCGGTAAAAGATTGCCGGACGGAGGCGACAAATTACGCTGTATGATCAAGCAGTTTGAAGAAGAGCTTCATAGACGGAAAATGAACCCTCGTCCTCAGAAAGTTCATGAGGAGCAGAAACATAGACAAGCTACTGGTAGCTCAAGTTCTGTTGGTGAGGGTGTGTCTAATAACTCGAGAGAAGAGAATTTGCCATCTCGTCCACAGTCGAAACCCTCTTTTGCATCTTGTTTTATGAAGAAATTGGAAGATAATACTAATTGTACAACTGGTGATTCATTTAGCAAGGAGAAGCCGCATTTCAAGCATTGTAGTAGCCAGGAAGAACGACACAATAGAGAACCTAAAAAAAGAAAGAGACATCGATCATCTTTAAAACCGATGCCATTTCAATTCTCGAGCAAACATTCCAAACGTGATACTTTTAGTGATAATGATAAAAGGTGCCGACCCAATTCTACCTTATCAGTACGGACAATTACAAGGAATCTATCAAGACGCTTCTCAAAAGATAATGGTGCATTTCAGGCAGTTCAGTCAGATGATTCAAGGTCCAGGAAGGGTCAACCCATTGTTCTTGATGATGACGACAGTAGTGACGACAGCGACAGTCCTCCTATTCTGGATAAAACAGAAAACAAAGCTCCTGAATATTTGAAAGATGCTAAGATCTATTTTCCTTCAAGAGATGATCCTGAGTGTGTTGAAGTTTGTTACAGCGACATGGAATGCCTTGCTCCTGAAGGCTACTTATCATCAACTATCATGAACTTTTACATTCGATATTTAAAGAAGCAAGAATCTCCGACAATATCAGACTACCATTTTTTCAACACATATTTCTACAAGAAACTTATAGAAGCTGTTTCCTGCAAGGAAAGTAACAGAGACACGATATTTGCAAAGTTCAGAAGGTGGTGGAAGGGTGTAAATATTTTTCAGAAGGCATATGTTTTGATTCCAATACACCAGGATCTTCATTGGAGCTTGAGCATTATTTGTTTCCCAGACAAAGAAGATGAATCAGGACCAATAATACTTCATTTCGACTCTTTGGGGCTTCACTCTAGTAGAATAGTTTTTGAAAACATTAAAAGCTATTTGATAGAAGAAAGGAACTATTTGAGTAAGGAATGCGCGTCTTCAGATGTTCCGATTGCAGACAGAATATGGAAGTCTCTTTCTCGTAGAATTGAAACTGAAGTCATGAAGGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTTTTTGTACTGTACTTCATCGAGCGTTTTATGGAAGAGGCACCCGATCGACTGAAAAAGAAAAATTTAGCAATGTTTAGCAAGAGATGGTTCAAACCTGAAGAGGCATCCGGTTTGAGAGCGAAAATTCACAAGTTGCTTGTAGCAGAACTACACAGTTCAATCAAGCCTGATGGTATTGCAGAATCTTCTTCATCTGCTGGTGATGCTACCGAATGCGATGAGACTGCAAAGAACTCTTCAATCAAAGATGGCATCGTGAGTTGCGATTCTCTCGTGATTGAATGA 1731 0.4136 MEKQQQQKLPLSLDWDTLHDTPPAELVVKPSAKAPDQKPPPYVDLEGLKDSELEDDIRRKKTLLETSGKRLPDGGDKLRCMIKQFEEELHRRKMNPRPQKVHEEQKHRQATGSSSSVGEGVSNNSREENLPSRPQSKPSFASCFMKKLEDNTNCTTGDSFSKEKPHFKHCSSQEERHNREPKKRKRHRSSLKPMPFQFSSKHSKRDTFSDNDKRCRPNSTLSVRTITRNLSRRFSKDNGAFQAVQSDDSRSRKGQPIVLDDDDSSDDSDSPPILDKTENKAPEYLKDAKIYFPSRDDPECVEVCYSDMECLAPEGYLSSTIMNFYIRYLKKQESPTISDYHFFNTYFYKKLIEAVSCKESNRDTIFAKFRRWWKGVNIFQKAYVLIPIHQDLHWSLSIICFPDKEDESGPIILHFDSLGLHSSRIVFENIKSYLIEERNYLSKECASSDVPIADRIWKSLSRRIETEVMKVPQQKNEYDCGLFVLYFIERFMEEAPDRLKKKNLAMFSKRWFKPEEASGLRAKIHKLLVAELHSSIKPDGIAESSSSAGDATECDETAKNSSIKDGIVSCDSLVIE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01801 576 Gene3D - 340 468 - -
Vifa4g01801 576 MobiDBLite consensus disorder prediction 146 160 - -
Vifa4g01801 576 MobiDBLite consensus disorder prediction 110 139 - -
Vifa4g01801 576 Pfam Ulp1 protease family, C-terminal catalytic domain 316 516 IPR003653 GO:0006508|GO:0008234
Vifa4g01801 576 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 44 556 - -
Vifa4g01801 576 MobiDBLite consensus disorder prediction 161 179 - -
Vifa4g01801 576 ProSiteProfiles Ubiquitin-like protease family profile. 301 491 IPR003653 GO:0006508|GO:0008234
Vifa4g01801 576 MobiDBLite consensus disorder prediction 87 222 - -
Vifa4g01801 576 MobiDBLite consensus disorder prediction 237 278 - -
Vifa4g01801 576 MobiDBLite consensus disorder prediction 87 109 - -
Vifa4g01801 576 SUPERFAMILY Cysteine proteinases 292 529 IPR038765 -
Vifa4g01801 576 MobiDBLite consensus disorder prediction 1 53 - -
Vifa4g01801 576 MobiDBLite consensus disorder prediction 237 252 - -
Vifa4g01801 576 Gene3D - 292 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01801 Vifa-Chr4 511003460 511024282 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01801 K16287 - gmx:100790705 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01801 4 511003460 511024282 Vifa4g01801 4 511003460 511024282 ECH