Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01663 ATGGGGACAGTTCTTGAAGCTGCAAACAAGGATACAAATGGAAGCATCCTAAATAAAAACCCCACAGTTGTGTTTGTGCTAGGTGGCCCAGGCAGTGGAAAGGGTACCCAATGTGCAAACCTTGTTGAACATTTTGGGTTTACTCATCTCAGTGCTGGTGATCTTCTGCGTGCCGAAATCAAATCTGGCTCTGAAAATGGCACAATGATCCAGAATATGATTAAAGAAGGAAAGATTGTTCCATCTGAGGTAACAATTAAGCTTCTGCAACGAGCAATGCAGGAAAATGGCAATGACAAATTTCTTATTGATGGTTTTCCTCGCAATGAGGAAAACCGTGCAGCCTTTGAGAAAGTGACAGGAATAGAGCCAACATTTGTCTTATACTTTGATTGCCCGGAGGAAGAGATGGAGAGACGGCTTCTTAGTAGGAACCAGGGTAGAGAAGACGACAACATTGAAACAATTAGGAAGCGATTCAAGGTTTTCTTGGACTCTAGTCTCCCTGTTATTAATTATTATGATGCTAAGGGAAAAGTCCGCAAGATTGATGCTGCAAGGCCTGTTGTAGAGGTATTTGATTCAGTCAAAGCAATTTTTGGTCCAAAAAATGAGAAGGCTGATTGA 627 0.4179 MGTVLEAANKDTNGSILNKNPTVVFVLGGPGSGKGTQCANLVEHFGFTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAMQENGNDKFLIDGFPRNEENRAAFEKVTGIEPTFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLDSSLPVINYYDAKGKVRKIDAARPVVEVFDSVKAIFGPKNEKAD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01663 208 Hamap UMP-CMP kinase [CMPK1]. 21 203 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vifa4g01663 208 NCBIfam UMP-CMP kinase family 23 200 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vifa4g01663 208 Gene3D - 8 200 IPR027417 -
Vifa4g01663 208 Hamap Adenylate kinase [adk]. 22 201 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g01663 208 Pfam Adenylate kinase 26 178 - -
Vifa4g01663 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 200 IPR027417 -
Vifa4g01663 208 FunFam Adenylate kinase 1 16 203 - -
Vifa4g01663 208 PRINTS Adenylate kinase signature 53 67 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g01663 208 PRINTS Adenylate kinase signature 148 163 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g01663 208 PRINTS Adenylate kinase signature 25 38 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g01663 208 PRINTS Adenylate kinase signature 165 179 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g01663 208 PRINTS Adenylate kinase signature 101 117 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g01663 208 ProSitePatterns Adenylate kinase signature. 101 112 IPR033690 -
Vifa4g01663 208 PANTHER NUCLEOTIDE KINASE 19 197 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g01663 208 CDD ADK 23 192 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01663 Vifa-Chr4 477506762 477511917 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01663 K13800 - gmx:100500111 383.645