Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01661 ATGCTAAAGGGGAAACTGTCGTTTTTCGGAGGTGGAGATTCTCGTTCGGTGGATAACAATTCGTCAAAGAATGGAGAGATTCTTCCTACATTGACGCTTGAAACTGATAAACAAGTCTATAGACCTGGTGATCCTGTTATTGTCACTATTCAGATCTCGAATCCTTCGAATGCGTACTCTCTTTTGATGGAAAGACTCAGTTTTGAAATCAGAGGCATTGAGAAATTGGATACTCAATGGTTTGTTACTCAAAAGGCTTTACCTAGTTCAAGGCAAAGAAGAGGTGAACATGTTTTTGTAGATTCTTCAACACCAATCCTAGTAGCAAACCAGATTATTAATGCTGGCGCAAGCAAATCATATGTTGTGAGAACAATGCTGCCTAGCATTATTCCACCATCGTACAAGGGTTCAAACATTCGCTATTTGTACTATGTTAGAAGTGCAATAACCGGAGGGTGGCTAATTCTGGAAAATGGGCAATCTCGCACTGAGCCAACAAAAGATGTTACTGATTTGGAAGTTCGTATTCCACTACAAATATGGGTAAACCAGAAAAGCAATGGATTTCCAAAGGATGATGATATTGTTCCCTTAACTACTGTACAACTGGATATATTTTGGAAAGAGATGGATGGAGATGCTGATTGGGTTAGAGCAAATGATATTGATGATGGTGTTGATGAGGATTATGACAGCTCAAGGGATGATATATCATCTGTTTCTTCGTATAACCCCACGAAAGAAAATATGTACAGAGGCTATGGAAGTTCTCTATCATTGCGATCTTCTTCTGCAAGATCATTGAACAGGGATGCTTTGGAAGGTCACCGAACAAGTTTATCTTCAAATATAGCACTTCCCCGGTTGTCTGTTGCTGAAGTATTATCTGATTCTGGTGCTGATGCCCTATCAACTCAGAAGTCATTTGCCATGGAGCAACAGAAATTTGGGAAGCAATTTTCTGCAGAAGATGATGCAGGAGTCTCCTCTTCACCGGAAGCTGGAGGTGTCGAATCTTTATCATTTAATTTTGTACAGACATTTTCTGCAGCAGAAGGCTTCATCAGAGGAAGGTCTTATAACATCAGACTTGATGATCAAATTTTGCTTAAATTTTCTCCAAAAAATTCCGACTCAACTTATTACTTCAGCGACATGATAGGTGGGACTCTAACTTTCTTTCCCGAGGAAGGAGCTAGGAGATGCCTTGAGATCTCAGTAACATTGGAAACTTCAGAAACTATAAATAGACGCTTCGTCCATCCTTCTAGAAGGAACTCCCCAACAATCACCAAGGTTCAGAGTGACCATCACGAGGTTGTTGCAGATTTGCTCCAGACAAGTTTCCTTTTTTCTGTCCCCATGGATGGTCCAATGACCTTCTCCACTCCACATGTATCTGTGCAATGGGTTCTCCGCTTCGAGTTTTATACAACTCCAAAATTTGTGGATTGGACAAAGTACGAGCATCCACTTCTGATTGAAAGAAGAGAAAAAACTGAGTGGGTTCTTCCAATTACTGTACATGCTCCACCACCTAGAACTCCTACTTCTGGCTCAAGAAGTGAGAAACTTTTCTCTCTGGACCCGATGTGGGTGCACACTTGA 1611 0.4097 MLKGKLSFFGGGDSRSVDNNSSKNGEILPTLTLETDKQVYRPGDPVIVTIQISNPSNAYSLLMERLSFEIRGIEKLDTQWFVTQKALPSSRQRRGEHVFVDSSTPILVANQIINAGASKSYVVRTMLPSIIPPSYKGSNIRYLYYVRSAITGGWLILENGQSRTEPTKDVTDLEVRIPLQIWVNQKSNGFPKDDDIVPLTTVQLDIFWKEMDGDADWVRANDIDDGVDEDYDSSRDDISSVSSYNPTKENMYRGYGSSLSLRSSSARSLNRDALEGHRTSLSSNIALPRLSVAEVLSDSGADALSTQKSFAMEQQKFGKQFSAEDDAGVSSSPEAGGVESLSFNFVQTFSAAEGFIRGRSYNIRLDDQILLKFSPKNSDSTYYFSDMIGGTLTFFPEEGARRCLEISVTLETSETINRRFVHPSRRNSPTITKVQSDHHEVVADLLQTSFLFSVPMDGPMTFSTPHVSVQWVLRFEFYTTPKFVDWTKYEHPLLIERREKTEWVLPITVHAPPPRTPTSGSRSEKLFSLDPMWVHT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01661 536 Pfam Rgp1 380 479 IPR014848 -
Vifa4g01661 536 PANTHER REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED 29 517 IPR014848 -
Vifa4g01661 536 SUPERFAMILY E set domains 30 154 IPR014756 -
Vifa4g01661 536 Gene3D - 22 171 IPR014752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01661 Vifa-Chr4 477457871 477463453 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01661 K20477 - gmx:100795634 813.527