Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01659 ATGGCTTCCAGACCAGGCATACTTACTGATTGGCCATGGACACCTCTTGGCAGATTCAAGTGGGTGATTGTAACACCATTTGTAGCAAACAGCACATACAATTTCTTGATCAACAGTCCAGAAGAAAAAGACCTAAGTAACTTCCTCATCTTCCCATATATGATGGTCAGAATGCTTCATGACCAAATTTGGATCACTCTTTCCCGTCATCGAACCGCCAAAGGCAAAAACAGAATCGTCGATAAGGGGATTGAGTTCGAACAAGTCGATCGAGAAAGCAATTGGGATGATCAAATATTATTCAATGCATTGATATTTTATATTGGTCAAATGTTGGTACCTGAATCACATAATTTGCCTATATGGAGAACTAATGGTGTGGTTATGACAATTCTTCTACATACTGGACCAGTGGAGTTTCTATATTATTGGTTACATAGAGCACTTCATCATCATTATCTTTACTCTAGATACCATTCTCATCATCATTCTTCCATTGTTACAGAACCAATAACTTCTGTGATACATCCATTTGCAGAGCACATAGCATACTTTGTGCTATTTGCAATTCCATTATACACAACAGCAATTACAAAAACAGCATCTATAGCATCCTTTGCTGGTTATCTTGCTTACATTGATTTCATGAATAATTTGGGTCACTGTAATTTTGAGTTCATTCCAAAGACCATTTTCACCATCTTTCCCATTCTCAAGTATACCATGTATACACCATCGTTTCACTCACTGCATCATACACAATTTAGAACAAACTATTCCCTCTTCATGCCAATTTATGATTACATTTATGGAACTGTTGATAAAGCTTCAGAAACGTTATATGAAAAATCATTGAACAAAGAAGAAGCATCTTCACCTCAATCTTCTGCATGGTACCTCTATTTCATGTGGCCATTCACTTTTTGGTCTGTTCTTGTCACTTGGTTTTATGGTCGAACTTTTGTTCTTGAGAGAAACTCTTTCGAAATGCTCAATTTGCAATCATGGGTTATTCCAAGATTTCATGTACAGTATCTTTTCAAATGGCAAAGAGAAACTTTGAATAAACTTATAGAAGAAGCAATACTTCAAGCAGAACTCAGCAAAGTTAAGGTTCTAAGTCTAGGTCTTTCAAATCAGGGAGACTTGTTGAATAGATATGGTGAACTATACATCAAAAGGTATCCTCAACTTAAGTTAAAGATTGTTGATGGAAGTAGCTTGGGTGTGGCTATTGTTCTTAATAGCATTCCAAAAGAAACAGATCAAGTTTTTCTTTGTGGTAGACTTGACAAGGTTTCATATGTCATTGCCAATGCTTTATGTGAAAGGGGCACTAAGGTTACAACAATGTATAGAGATGATTATGAGAATCTTCTCTTAAGACTTTCCCTAGAGTCCAAAAAAAATTTGGTTTTTCCAGGATCAAATTCTGCAAAGATATGGCTAGTTGGAGACCAATGTGATGAGGTAGAACAAAAAAAGGCACCAAAAGGAGCATTGTTCATACCAATTTCTCAATTCCCTCCAAAGAAACTCCGAAAAGATTGCTTCTATCTTAGCACACCAGCCATGATAACTCCTCCTTCTTTAGCCAATGTCCACTCCTGCGAGAATTGGCTTCCAAGAAGAGTGATGAGTGCGTGGCGTATTGCGGGAATATTGCATGCTTTAGAAGGTTGGGATGTTCATGAATGTGGAGAAGTGATGTTTAGTATTGAGAAAGTGTGGCAAGCAAGTCTTCAGCATGGATTTAGGCCATTGAAGATTAATAATCCTCTTGCTTGA 1788 0.3719 MASRPGILTDWPWTPLGRFKWVIVTPFVANSTYNFLINSPEEKDLSNFLIFPYMMVRMLHDQIWITLSRHRTAKGKNRIVDKGIEFEQVDRESNWDDQILFNALIFYIGQMLVPESHNLPIWRTNGVVMTILLHTGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFVLFAIPLYTTAITKTASIASFAGYLAYIDFMNNLGHCNFEFIPKTIFTIFPILKYTMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTVDKASETLYEKSLNKEEASSPQSSAWYLYFMWPFTFWSVLVTWFYGRTFVLERNSFEMLNLQSWVIPRFHVQYLFKWQRETLNKLIEEAILQAELSKVKVLSLGLSNQGDLLNRYGELYIKRYPQLKLKIVDGSSLGVAIVLNSIPKETDQVFLCGRLDKVSYVIANALCERGTKVTTMYRDDYENLLLRLSLESKKNLVFPGSNSAKIWLVGDQCDEVEQKKAPKGALFIPISQFPPKKLRKDCFYLSTPAMITPPSLANVHSCENWLPRRVMSAWRIAGILHALEGWDVHECGEVMFSIEKVWQASLQHGFRPLKINNPLA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01659 595 PANTHER STEROL DESATURASE 14 587 - -
Vifa4g01659 595 Pfam WAX2 C-terminal domain 424 587 IPR021940 -
Vifa4g01659 595 Pfam Fatty acid hydroxylase 138 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01659 Vifa-Chr4 477032710 477036946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01659 1 588 Lipid Metabolism Gene Families AT1G02190 53.120 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01659 K15404 - gmx:100790115 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01659 4 477032710 477036946 Vifa4g01659 4 477032710 477036946 ECH