Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01651 ATGGGTTGTTGTTGTGGTTGGAAGAAGTTGTATGGCATCGGTAGTTCACTTTCTGCACCAATGTTACCACTCTCACCCTTTCGCCCTCTCTCTTCTTCTTCTTCCTCCATTTCCCCACTAGTACAACACCAACAACAACCAAAGCCACAACTACGAAGCTCACAACTCGTAGCATTGGAATACGCTGACCTCAACCTCTCCAACAATTTGGAACTGGGTCATGTCAGAATCAGGCAACATGTTAATCCCCTCAGTTCTTCTTTCGCTACTCCTGCACAAGTACCAGACTGGAACCAGGTCTTTGCAGACCCTGGATTGCCACTCATGGTAGATATTGGATGTGGCAGTGGCAGGTTTCTTATGTGGCTTGCAAAAAGAACACCTAAAGTGAGAAACTATTTGGGATTGGAAATAAGGCAGAGGATGGTCAAGCGTGCTGAGTTATGGGTAAAAGACCTGGCTCTAGATAACATATATTTCTTGTTTGCAAATGCCCCAATTTCTTTCAAGCAGTTAGTAGAATCATATCCCGGGCCATTGCAGTTAGTTTCAATTTTGTGTCCAGACCCTCATTTCAAGAAAAAACATCATAAAAGAAGAGTTCTGCAGAAGCCTTTGGTTGGTGCTATTGTAGACAACTTAACTCCTGGGGGACAGGTGTTCATACAGTCTGATGTGGTTGAAGTGGCACTTGACATGAAAAACCAGTTTGATGAAGTTGATGCACTTAGTCACATAGATGCTTTAAACCCTGCTATACTGTGTGACCGTGAAGGATGGTTATTAAGCAACCCTATGGGGATTAGGACTGAGAGAGAGATTCATGCAGAATTCGAAGGAGCGAAAATCTATCGAAGGTTGTACGAGAAGAAGCAGATGTGA 882 0.4365 MGCCCGWKKLYGIGSSLSAPMLPLSPFRPLSSSSSSISPLVQHQQQPKPQLRSSQLVALEYADLNLSNNLELGHVRIRQHVNPLSSSFATPAQVPDWNQVFADPGLPLMVDIGCGSGRFLMWLAKRTPKVRNYLGLEIRQRMVKRAELWVKDLALDNIYFLFANAPISFKQLVESYPGPLQLVSILCPDPHFKKKHHKRRVLQKPLVGAIVDNLTPGGQVFIQSDVVEVALDMKNQFDEVDALSHIDALNPAILCDREGWLLSNPMGIRTEREIHAEFEGAKIYRRLYEKKQM 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01651 293 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 65 290 IPR003358 GO:0006400|GO:0008176
Vifa4g01651 293 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 50 290 IPR003358 GO:0006400|GO:0008176
Vifa4g01651 293 Gene3D Vaccinia Virus protein VP39 76 293 IPR029063 -
Vifa4g01651 293 CDD AdoMet_MTases 110 223 - -
Vifa4g01651 293 Pfam Putative methyltransferase 107 250 IPR003358 GO:0006400|GO:0008176
Vifa4g01651 293 FunFam tRNA (Guanine-N(7)-)-methyltransferase 76 293 - -
Vifa4g01651 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 104 246 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01651 Vifa-Chr4 473257170 473259568 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01651 K03439 - gmx:100788255 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01651 4 473257170 473259568 Vifa4g01651 4 473257170 473259568 ECH