Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01644 ATGGAGGTGGAGTTAGAGCCTCGCGTGAAGCCTCTTCAATTCAAGGTCAAAGCCATGTCCAGAGAATCTCCCTCGCAGAAGGCTCTCAACGTTCTCGACTCCGACCTCCGTTCTCACTGGTCCACCGCCACCAACACCAAGGAGTGGATTCTACTCGAACTCAATGAGCCTTGCTTGTTGTCACATATACGGGTTTACAACAAGTCTGTGCTCGAGTGGGAAATTGCAGTGGGTTTGCGGTACAAGCCAGAGACATTTCAAAAGGTTCGCCCACGATGTGAAGCGCCCAGACGTGACATGACCTACCCTACAAATTACACTCCATGTCAATATGTGAGAATATCTTGTTTGCGAGGAAATCCCATTGCTATTTTCTTTGTTCAGCTAATAGGAGTTTCTGTGGCTGGTCTTGAAGCTGAGTTTCAACCAGTTGTTAATTACTTGCTACCCCACATTCTATCTCATAAACAGGATCCTCATGATATGCATCTCCAGTTGCTGCAAGACATGACAAACCGGTTACTAGTATTTCTTCCACAGCTTGAGACAGACCTTGCAAGCTTTCCAGATAATCAAGAATCTAACCTACGATTTCTTGCCATGCTAGCGGGTCCTTTTTATCCTATTCTTCATGTGGCGAATGGAAGGACAACTTCAAAGCATGCGGGCAATATCACCGACTCTGAAGTCTACAAAAGTAGTCAACTGTCACCGACACTAACTGTTTCCTCTAACTTTGAGCCAAGGAGATCACGAAGTGCATCATCTTTCAATTTGTCTGCATATCGTTCCATGGTTTTAAGGCCAGATGCAATTTTTATGCTGCTGAGAAAGGCTTACAAAGATTGTGATCTGGGCTCTGTCTGTAGAATGGCATCTAGAATCATGCAGAAACTCATTGATCCCGAGCAAAATGTATCATACCCTCAAAATGAACTTACTGACCCTTTGGAGGAGAAATCAAAATTGGAACTTACTAGTCCTTGCACTTTAGTTGATTACTCAAACCTGTTTGGTGAGGAGTTTAGAATGCCAGATGAGCATTGGGATTGCAGCTATCTTAATGTTTTAGATATTGGGGCCGTGGAAGAAGGGATCTTACATGTTCTTTATTCTTGTGCAGCTCAGCCTGTTCTTTGCAGCAAGATGGCTGAGAGAATTTCAGAATTTTGGGCTGCTCTGCCGCTTGTACAAGCTTTGCTGCCAGCTTTACGCCCATTGTTGAGCAATTCTTTTGATGTTGTGGACAACTCTTTTTCTCAGTGGAATCAACCTATTGTACAACAGGCTTTATCTCAGATTGTTGTTACAGCAACATCAGCTACTCATTGCTCTCTTCTTCATGCTTGTGCTGGTTATCTATCTTCGTATTCACCATCTCACGCTAGGGCTGCTTGTGTGCTGATTGATCTATGCTCTGGTGTACTAGCACCATGGATTACTCAAGTGATTGCAAAGGTTGATCTTGCTCTGGAGCTTTTGGAGGATCTTTTTGGTATAATCCAGGATGCTCACAATTCACTCATTCGTGCTCGCGCTGCCTTGAAGTATATTGTGCTAGCTCTTTCTGGGCATGTGGACGACATATTGGGAAAATATAAGGAAGTTAAACACAGAATCCTCTTTCTTGTGGAGATGCTGGAGCCTTTTCTTGATCCTGCTATTGCTGTATCAAAAAGCAAAATAGCTTTTGGGGATCTATCATCTTCATTTCTCGAAAAGCAGGAGCACAATTGCATGATTGCTCTAAATATCATCCATGCTGCAGTACAAAAGCCAGCTGTTCTTCCTTCTTTGGAATCAGAATGGAGACATGGGTCTGTGGCTCCTAGTGTGCTTCTCTCGATACTGGAACCACACATGTTACTGCCACCTGACGTTGACCTTTGCAAATCTGTTTTAAGACCAACTGAAAATGAAGCTGCATCTGTTTCACTTCTTTCTTCTGGGGTTAATGGAGGAGGTACTTTTTCCAAGATCAATAGTCAAGATGAGTCTGATGGAAAAACGGAGGTACCAGAAACAGCAGGAAGATCTGATTTTGTTGAAGACCGTAATCTACTTTTTGCTCCACCAGAACTGCAGGGTATTTCATTGAGAAGCAATTCTAATGTTCCTAACCATAATAGCTCTGTTTCTAGCGATGCGGATGTGAGATTGGAATCCAAACATGTGGTGGATAAATCTTCCACCCATCGTTTTCTATCCAATGTTCTCATAGATTCCGGCCTTGGTTTTGAATACTTCAACCTGCAGGCAGATTATTTTCAACTTTTAAACTATCATGATTGTGAGCTACGTGCTTCTGAGTTTAGGCGCTTGGCTTTAGATTTGCATTCTCAGAAAGAAATCACTGTTGAAACTCATGATGCTGCTATTGATGCTTTTCTGTTGGCAGCAGAATGCCATGTAAATCCTTATTTTATGTTTTCTATTGGAGCCTCTTCAAAATTTCCAGACCTTTTGAACGTAAAGGAAGGTAAAACCGAGCAGTCTCATGCTAATGTAGATGCAAAAGGGGCTTTTGAAAAAAATAAACCTAACTTAGAAACAATAGCGCATATAGAGAGAAAAAGAGATAAAGTTGTCTTTCATATTCTGCTTGAGGCTGCAGAGTTAGATAGGAAGTATCATTTAAGAGTATCTGATGGTGAAAGTGGTTCTTATTATGCCGAGGGTTTTGATGAACAGGTTATCAAGATGTCTTCTCACGATGAGCAACATGCAGATGCTTTGACCTTAGTTCGACAAAACCAAGCTCTACTCTGTAACTTTTTGATCAAACGTTTGCAGAAAGACCAAATTTCAATGCATGAAATTCTTCTGCAAAGCCTTGTGTATTTTTTGCACACTGGCACTAAACTATTTTGCCCTCCAGAAAGTGTGATTGATATCATTCTAAAATATGCTGAAGACTTGAACAAGTTGCTGGCATCTTTTCATCATGAGCCAAAGGAAGGTAATTTGCATTTGGCAGAAGAAAGAGCACGTGGGGTAGAGCGACGTTGGTTACTGTTACAACAATTGGTTATTGCTTCAAGCAATGGAGGCGAAGAGGAAAATTTTGGAACTAGCATTCAAAGCGGTTACCTCTGTGGAAATTTAGTTCCCCCTTCAGCTTGGATGCAGAGAATTTCTCATTTTTCTTGTTCTGTGTACCCTTTGGTTCGATTTCTAGGGTGGATGGCAGTATCTCGTAATGCCAAAGGATATATGAAAGATCAAATTTTCCTTGCATCTGATCTGTCTCAGCTGACATATTTACTTTCCATTTTTGCTGATGATCTTGCCGTTGTTGATAATGTGATCAATAAAAAGTATGAAGAGGTTAAGATTGAAGGTTCACAGTTTGAACATAGTTCCTCAGCCAAGAAAGAGTTTGAGCGAGGCAGCCAATATCATGAAGAACAATCTTTTTCTGCAGTCTACCCTGAACTCTGGAAGTTCTTTCCAAATATGAAAGGGAAGTTTAAATCTTTTGGAGAAGCCATTTTAGAGGCTGTTGGTTTGCAGCTAAGATCTGTATCTTCCACTCTTGTGCCTGATGTCTTGTGTTGGCTTTCCGAGCTGTGTTCATGGCCATTTTCTTTCACTTCTCCTATTGGTAATGGTAATTTGAAAGGTTATAATGCGAAGAATGCCAGAACAATCATCCTTTATATACTCGAAGCTATTATAGTTGAGCACATGGAAGCTGTGGTTCCCGAGACACCTATGTTAGTGCATGTGCTTGTGTCACTTTCAAGTTCTTCATACTGTGATGTGCCATTTCTTGACGCTGTGTTACGTTTGTTGAAACCAATTATTTCTTATTCTTTGTCAAAGGTCTCTCATGATGAAAGGTTATTAGAAGTTGATTCCTGTCTGAACTTCGAGGAATTATGCTTTAGTGTTCTATTAAGTAAAATCAAACAGAAAGATAAAGAATACAATGTAGCACTGGAGCCAACAGCTTCTTTCTATGATTATCTCAGTGCATTTCAATGTGTTATGGATAATTGCAGATTACTATTAGTGAATTCATTAACATCATTTGGTGTTATTCCTCTTCAGTTGCCCCCTTTTCCTCGTGTGAATGTTGGTGGGCTTTCTGATGATAACATACCAAATCCATGGTTTCTTAGTGATATATGTCACCATTCATTTGAGAATGATATCCATAATGTAGAACATAACAATAACAATTCTGCTGCTGCTGATGATCATTGTCATTGTCCTTCTAAAGAATTAGAAGGGTTTTCTAAAGACGTAGAGTTTCTCATATCTGAACTTACTCCAGCTATTGAACACTGTTGGAATCTTCATCGTCAGATAAGCAGAAAACTGACAATATCATCAGCAGAGTGTTTTGTCTTCTCAAAATGTTTGACATCGCTTTCTCCAAGATTTCAGAAGTTTGAAGATGATGATCAAGTTTCTTCACCGGCTATATTATCATCTGACCAGTTTTCTCTTCCTTGGAGAATTGGTGTTCAAGGCCTCTCTGAATTGATCACTGTCCTCCAAGAAAGCAGTTGCTGGGAAGTTTCTTCTTTGATGCTTGATTGTCTACTCGGAATACCGTATAGCTTTTCCCTGGACAATGTGGTAGGCATTATATGTTCTTCCATAAAGAAAGTTTCCTGCAATGCACCTAAAATCTCTTGGCGTTTGCGGAGCGATAAATGGCTGTCTTATTTGACTGCCAGAGGCATCTATAACAGCCGAGAAAGCGAGGTTCCTCTCACAGATCTATTTTGTACATTCCTAGGACATGCAGAACCTGAACAACGCATTATAGCAGTTAAACATTTGGGAAGACTTCTTGGTCAGTGTATGAATGGTGAAAGAGCACCGATAAATTCTAGAATTTGCACCGACTTAGTTCCAAATAAGTTAGTTTTATCTGTTCCTGATTATGTTCTATCTCAGTTGGTTTCAAATACTTGGGATGAGGTTGTTGTGCTGGCATCATCTGATACATCATTACAAATAAGGATTCATGCAATGATTCTTCTTTCAAATTATATACCATTTGCTGAGCGACATCATTTACAATCTCTTCTTATAGCCGCTGATAGCATTTGTTGTTTGCGTAGTGCACAGCCATCACACGATGGTTCTATCCGTCAACTTTCATTGGCAGTTATTGCTTATGCCTGTCTTTGTTCACCACCCGAAGATATTTCCTTGATTCCTCAAACTGTATGGGAAAATGTTGAAACTTTAGCGTCAACAAAATGTGATGGAAATCTTGGAGACCTTGAAAAGAGGACTTGTCAAGTTCTATGTAGATTGAGAGACGGAGACGTGGACAAAGAGGCCCTTAAAGAAGTACTTTCTTCGAATTCTTCAAAGCAGTATGATCCAGATTTTGCTATCACGCGTGAATCGGTGCTCCAGGTTCTTGGCAACTTGACAGCGGTTCACTCATACTTTGATGTATTCTCAACAAAAATTAACGAAGATGATATGGAGCTAGAGGAGGCTAAGTTGGAACTAGACATCATACAGAAGGAACATGCATTACCCGAACAAATGGAGGATTCCAAAGACTGGAATCAAATTCCAAGTCTACCCTCCAGCGGAAAGGATGTTTCAAGGCTTCAGCAGATCAGAGAATGCATTCATACCATAGAAAAGTCCAAACTTAAAGAAGATATCCTAGCCCGTAGGCAAAAGAAACTACTTATGAGACATGACCGTCAAAAATATTTGGAAGAAGCAGCTTTACGGGAAGCAGAAATTCTGCAAGAACTTGATAGAGAGAGAGTGGCTGAAATGGAGAAAGAGATGGAAAGACAAAAGTTATTAGAAATAGAGCGTGCTAAAACAAGGGAACTGCGTCACAATCTGGATATGGAGAAAGAGAAACAAGCACAGAGGGAACTTCAGCGTGAAATAGAGCAAGCAGAATCAGGAATTCGGCCTTCTCGGCGTGACTTTCCTTCCTCCACTCACAACAGTCGACCTAGGGATAGATTTCGGGAAAGAGACAATGGAAGATCTGGTAATGAAGGGAGCACTAGAGCTGGCACTGGAAGCTTACAGCCTGAAATTCCTTCCACCAATTCATCAATGGCAGCCTCACAAACTATAGTTCTTTCTGGCTCGCGGACATTTTCAGGCCAGATGCCCACTATCTTACAGTCGCGTGACCGACAGGATGACAGTGGCAGCATATACGAAGAGAATATTGATGGAAGCAAGGACTCCGGGGATACCGGCAGCTTTGGAGATCCCGAATTAGCATCAGCATTTGATGGCCCATCTGGTGGATATGGGTCTCAAAGACATAGCTCAAGGGGAAGTAAGTCAAGGCAGCTTGGTGAACGTAGAGACAGAGAGAACAGACGTGAAGGGAAGTGGGAAAGAAAACACTGA 6363 0.4111 MEVELEPRVKPLQFKVKAMSRESPSQKALNVLDSDLRSHWSTATNTKEWILLELNEPCLLSHIRVYNKSVLEWEIAVGLRYKPETFQKVRPRCEAPRRDMTYPTNYTPCQYVRISCLRGNPIAIFFVQLIGVSVAGLEAEFQPVVNYLLPHILSHKQDPHDMHLQLLQDMTNRLLVFLPQLETDLASFPDNQESNLRFLAMLAGPFYPILHVANGRTTSKHAGNITDSEVYKSSQLSPTLTVSSNFEPRRSRSASSFNLSAYRSMVLRPDAIFMLLRKAYKDCDLGSVCRMASRIMQKLIDPEQNVSYPQNELTDPLEEKSKLELTSPCTLVDYSNLFGEEFRMPDEHWDCSYLNVLDIGAVEEGILHVLYSCAAQPVLCSKMAERISEFWAALPLVQALLPALRPLLSNSFDVVDNSFSQWNQPIVQQALSQIVVTATSATHCSLLHACAGYLSSYSPSHARAACVLIDLCSGVLAPWITQVIAKVDLALELLEDLFGIIQDAHNSLIRARAALKYIVLALSGHVDDILGKYKEVKHRILFLVEMLEPFLDPAIAVSKSKIAFGDLSSSFLEKQEHNCMIALNIIHAAVQKPAVLPSLESEWRHGSVAPSVLLSILEPHMLLPPDVDLCKSVLRPTENEAASVSLLSSGVNGGGTFSKINSQDESDGKTEVPETAGRSDFVEDRNLLFAPPELQGISLRSNSNVPNHNSSVSSDADVRLESKHVVDKSSTHRFLSNVLIDSGLGFEYFNLQADYFQLLNYHDCELRASEFRRLALDLHSQKEITVETHDAAIDAFLLAAECHVNPYFMFSIGASSKFPDLLNVKEGKTEQSHANVDAKGAFEKNKPNLETIAHIERKRDKVVFHILLEAAELDRKYHLRVSDGESGSYYAEGFDEQVIKMSSHDEQHADALTLVRQNQALLCNFLIKRLQKDQISMHEILLQSLVYFLHTGTKLFCPPESVIDIILKYAEDLNKLLASFHHEPKEGNLHLAEERARGVERRWLLLQQLVIASSNGGEEENFGTSIQSGYLCGNLVPPSAWMQRISHFSCSVYPLVRFLGWMAVSRNAKGYMKDQIFLASDLSQLTYLLSIFADDLAVVDNVINKKYEEVKIEGSQFEHSSSAKKEFERGSQYHEEQSFSAVYPELWKFFPNMKGKFKSFGEAILEAVGLQLRSVSSTLVPDVLCWLSELCSWPFSFTSPIGNGNLKGYNAKNARTIILYILEAIIVEHMEAVVPETPMLVHVLVSLSSSSYCDVPFLDAVLRLLKPIISYSLSKVSHDERLLEVDSCLNFEELCFSVLLSKIKQKDKEYNVALEPTASFYDYLSAFQCVMDNCRLLLVNSLTSFGVIPLQLPPFPRVNVGGLSDDNIPNPWFLSDICHHSFENDIHNVEHNNNNSAAADDHCHCPSKELEGFSKDVEFLISELTPAIEHCWNLHRQISRKLTISSAECFVFSKCLTSLSPRFQKFEDDDQVSSPAILSSDQFSLPWRIGVQGLSELITVLQESSCWEVSSLMLDCLLGIPYSFSLDNVVGIICSSIKKVSCNAPKISWRLRSDKWLSYLTARGIYNSRESEVPLTDLFCTFLGHAEPEQRIIAVKHLGRLLGQCMNGERAPINSRICTDLVPNKLVLSVPDYVLSQLVSNTWDEVVVLASSDTSLQIRIHAMILLSNYIPFAERHHLQSLLIAADSICCLRSAQPSHDGSIRQLSLAVIAYACLCSPPEDISLIPQTVWENVETLASTKCDGNLGDLEKRTCQVLCRLRDGDVDKEALKEVLSSNSSKQYDPDFAITRESVLQVLGNLTAVHSYFDVFSTKINEDDMELEEAKLELDIIQKEHALPEQMEDSKDWNQIPSLPSSGKDVSRLQQIRECIHTIEKSKLKEDILARRQKKLLMRHDRQKYLEEAALREAEILQELDRERVAEMEKEMERQKLLEIERAKTRELRHNLDMEKEKQAQRELQREIEQAESGIRPSRRDFPSSTHNSRPRDRFRERDNGRSGNEGSTRAGTGSLQPEIPSTNSSMAASQTIVLSGSRTFSGQMPTILQSRDRQDDSGSIYEENIDGSKDSGDTGSFGDPELASAFDGPSGGYGSQRHSSRGSKSRQLGERRDRENRREGKWERKH 2120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01644 2120 Coils Coil 1947 1967 - -
Vifa4g01644 2120 MobiDBLite consensus disorder prediction 1942 2120 - -
Vifa4g01644 2120 MobiDBLite consensus disorder prediction 1976 1997 - -
Vifa4g01644 2120 SUPERFAMILY ARM repeat 127 1274 IPR016024 -
Vifa4g01644 2120 PANTHER GALACTOSE-BINDING DOMAIN-LIKE, ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 1309 - -
Vifa4g01644 2120 MobiDBLite consensus disorder prediction 657 677 - -
Vifa4g01644 2120 SUPERFAMILY Galactose-binding domain-like 11 134 IPR008979 -
Vifa4g01644 2120 MobiDBLite consensus disorder prediction 1998 2048 - -
Vifa4g01644 2120 Gene3D - 9 138 - -
Vifa4g01644 2120 MobiDBLite consensus disorder prediction 2097 2120 - -
Vifa4g01644 2120 Coils Coil 1813 1833 - -
Vifa4g01644 2120 CDD UDM1_RNF168_RNF169-like 1912 1965 - -
Vifa4g01644 2120 MobiDBLite consensus disorder prediction 1942 1969 - -
Vifa4g01644 2120 Coils Coil 1904 1924 - -
Vifa4g01644 2120 MobiDBLite consensus disorder prediction 2049 2063 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01644 - - tpra:123882956 3716.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01644 4 471935563 471971228 Vifa4g01644 4 471935563 471971228 ECH