Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01643 ATGGCACAAGTGAAGAACAAGCAAGTGATTCTCACAGACTATGTTACTGGTCTTCCTAAAGAATCAGACATGAACGTAGTTGACAACTCCATAACTCTTAAGATTCCAGAAGGACTCGGTGCTCTCACACCTGGTTTGCCACTGAGAGGACTTGGAGTGTCTAAAATTGTAGAATCTGGAGATCCAGATTATAAGAAAGATGATTTAGTTTGGGGTATGACTAAATGGGAAGAGTATAGTTTGATTCCTGCAGCTCAAATACTTTTCAAAATTGAGCATTTTGATGTTCCACTTTCTTACTATACCGGAATTCTCGGTATGCCGGGAATGACTGCTTATGCTGGTTTCTTTGAAGTAGGCTCTCCCAAGAAAGGAGAGAATGTTTTTGTTTCTGCTGCCTCTGGTGCTGTTGGTCAGCTTGTTGGCCAATTCGCTAAGTTGCATGGTTGCTATGTAGTTGGAAGTGCTGGAACTAAAGAAAAGGTGGATCTGTTGAAGAATAAATTTGGGTATGATGAAGCCTTTAACTACAAAGAAGAACCAGACCTCGATGCAGCTTTGAAAAGATACTTTCCTGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGAAAGACACTTGATGCTGTGCTCCTGAATATGAGAGTCCATGGTCGCATACCCGTCTGTGGAATGATTTCACAGTATAATCTTGATCAACCTGAAGGTGTAACGAATTTGACACATATCATATATAAGAGGATTCGAATTGAAGGCTTCGGTGTATTTGAATACTATCACCTTTATACAAAATTTTTAGAGTTTGTTTTGCCTCTTAAAAGAGAAGAGAAAATTGTTTATGTGGAAGATATTGCTGAGGGTCTTGAGAATGGTCCTGCAGCTTTGGTTGGCCTTTTTAGTGGTCGAAATGTTGGTAAACAAGTGCTTGTTGTTGCTCATGAGTGA 945 0.3989 MAQVKNKQVILTDYVTGLPKESDMNVVDNSITLKIPEGLGALTPGLPLRGLGVSKIVESGDPDYKKDDLVWGMTKWEEYSLIPAAQILFKIEHFDVPLSYYTGILGMPGMTAYAGFFEVGSPKKGENVFVSAASGAVGQLVGQFAKLHGCYVVGSAGTKEKVDLLKNKFGYDEAFNYKEEPDLDAALKRYFPEGIDIYFENVGGKTLDAVLLNMRVHGRIPVCGMISQYNLDQPEGVTNLTHIIYKRIRIEGFGVFEYYHLYTKFLEFVLPLKREEKIVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVVAHE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01643 314 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 103 273 IPR036291 -
Vifa4g01643 314 Gene3D - 104 280 - -
Vifa4g01643 314 PANTHER PROSTAGLANDIN REDUCTASE 42 311 IPR045010 GO:0016628
Vifa4g01643 314 Pfam Zinc-binding dehydrogenase 136 268 IPR013149 -
Vifa4g01643 314 FunFam Prostaglandin reductase 2 104 280 - -
Vifa4g01643 314 Gene3D - 42 308 - -
Vifa4g01643 314 Gene3D - 1 41 - -
Vifa4g01643 314 CDD double_bond_reductase_like 4 311 - -
Vifa4g01643 314 SUPERFAMILY GroES-like 4 141 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01643 Vifa-Chr4 471792782 471794268 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01643 K19825 - gmx:100809668 509.605