Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01642 ATGGGACAAATCTTCGACAAACTTCAAGGTGAAGCGTGGAGGAAAAAGCAAGTCAGGAAGATTACTGATCGAGTTTTTCAGAATGTAAGGAATCAAATTCGAACGGAAAATTTGAGTTTTGAAGATCTGTATATTGCTGTTTTACTTGTTTACAATGATATCAACAAGTTTATTCCTGGTCCCCATTTTGATCCTCCATCGAAAGAAAACGTCAGACAAATCATGCAGGAATGTGATATAAACTTGGATGGGGCAATTGATCATGACGAATTTTGCGATTTCATCCAGAAAATGACAGCTGATACATTCACTGTTGTTAGTCAAAAACTTATTCTGACTTTGGTTGTAGCACCAAGTGTTGCGATGGCAACAAAAAGAGCCACTGAAGGTGTCCCTGGTGTTGGAAAAGTGGTTCAAAGGTTACCAAATGCACTTTATGCATCGCTTGTTACCCTTGCAGTTGTGTGGTTCCAAAAGATGGGAGATCAGTCTGGAATCTGA 501 0.3932 MGQIFDKLQGEAWRKKQVRKITDRVFQNVRNQIRTENLSFEDLYIAVLLVYNDINKFIPGPHFDPPSKENVRQIMQECDINLDGAIDHDEFCDFIQKMTADTFTVVSQKLILTLVVAPSVAMATKRATEGVPGVGKVVQRLPNALYASLVTLAVVWFQKMGDQSGI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01642 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Vifa4g01642 166 SMART efh_1 70 98 IPR002048 GO:0005509
Vifa4g01642 166 SUPERFAMILY EF-hand 38 100 IPR011992 -
Vifa4g01642 166 PANTHER CALCIUM ION-BINDING PROTEIN 1 160 - -
Vifa4g01642 166 Gene3D - 2 105 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01642 1 156 EF-hand Containing Proteins AT1G64850 67.308 3.62e-78 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01642 - - gmx:100526914 265.388