Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01638 ATGTCGCAACCGCAACAACATCTCAACAGCAACATCCCCGTAAGCGAGATTTTCTGGACTCTCGTCGACAAAGCCGACAAAAAATTCTCCAAAATCAGAGACTTACCTTACTACCAACGCTCCAGGCACGATACATATTTCTCCAACGTCTTCAAAGTCTACACACAGTTATGGAAATTCCAGCAAGAGAATCGCCAGAAGCTAATCGAAGCCGGCTTGAAACGCTGGGAGATCGGCGAAATCGCCTCGCGAATCGGCCAGCTCTATTTCGGACAGTACATGAGGACTTCTGATTTTAATTATTTATCAGAGTCTTATATTTTCTATGAAGCTATTTTCACTCGTGATTATTTTAAAGACGGTTTGTTTCAGGATGTGAGCATTGCGAATAAACAGTTGAGATTCTTGGCTAGGTTTTTGACGGTTTGTTTGCTTTTGAATCGGAGGGAAGTGTTGCAGAAGTTGGTTGATCAGCTTAAGGTGTTGGTTGAGGAGTGTAAGAGAGTGTTTCAGGATAGTGATTTTAAGGAATGGAAGGTTGTTGTGTTGGAAATTGGGAGGTTTTTGAAGGCGGATACTGCTTTTATGAATGTTAGACCCTTGAGATATAGTTTGGTTTTGGATTCTCACCCTGATAATTTGCCACATGTTCCTGTTGCTGTTGCGAAGCGGAATTTGAAATTGCGAGATGCTGTGTTGAGTAGCTTTCATCATAACGAGGTTAAGTTTTCGGAGCTCACTATTGACACTTTTAGGATGCTTCAATCTTTGGAATGGGAACCTAGTGGCTCGTTTTACCAATCTAGTGGCTCAAAACTTAGTCAGAATGGGGCAGCCGGGACTGGTCGTGTCAGTTACTTACAAGATATTGCTGATCCTACGTTACCGGCAAACCCACGGAAAGCTATATTATACCGTCCTTCGCTGACACATTTCGTAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCATTGGATGGTGTTCTCCTTGTATATTTGTCAGCTTCAGGAGCAGGATCTAGTGGGGCTGGACATAATGAATCTGGTTGTTTAAACTTTGGCTCCCGTGGAGATAAAGGATCAAACTGCATATATCCATCTGACTTTCTACCGTTTACTAGAAGACCACTTCTTTTAGTCATTGATAATGAGAACAGCAAAGCTTTTAAGGTTATAGCAGAGGCAAGTAAAGGAGAGTCAGTGGCAATGCTCCTTTCTCCAAGCCGCCTGCCTCCTATTGCGTCTGATTTCTCACACTCCTCAAATGGGAGCTTATTCACCATGTTTCTTACAGCTCCTCTGCAATCTTTCTGTCTGCTGCTAGGATTTTCAGGCACTGATATTGATTTGGACTTGTACAATAAAGCTGAAACACTGCTCTCGTCATCATTAAATAACTGGGGTATGGCGTTGGCATCATCAGACACACTTGATCCAGTTTGGGGACAGGTTTTAGGCGATCCGTTCATAAGGAGACTTCTTTTGAGATTCATATTTTGCCAGACAGTGTTGACCTTGTATGCACCAGTTTACAATCAAAACGAATTTCTTCCGACATGTGTCCCTTCTCTTCCAACACTTGTCCTGCCCCCAAGCTACACGTATCAAAGTGTAATTCTGCATCTAGCAAGCATTTTTAGTGCAACTAAGCACTTCATATTTTCCGAGGATGTTTCTCCTGAAACTATATCTACCAACGTGGATCAGTTGTGA 1713 0.4267 MSQPQQHLNSNIPVSEIFWTLVDKADKKFSKIRDLPYYQRSRHDTYFSNVFKVYTQLWKFQQENRQKLIEAGLKRWEIGEIASRIGQLYFGQYMRTSDFNYLSESYIFYEAIFTRDYFKDGLFQDVSIANKQLRFLARFLTVCLLLNRREVLQKLVDQLKVLVEECKRVFQDSDFKEWKVVVLEIGRFLKADTAFMNVRPLRYSLVLDSHPDNLPHVPVAVAKRNLKLRDAVLSSFHHNEVKFSELTIDTFRMLQSLEWEPSGSFYQSSGSKLSQNGAAGTGRVSYLQDIADPTLPANPRKAILYRPSLTHFVAVLATICEELPLDGVLLVYLSASGAGSSGAGHNESGCLNFGSRGDKGSNCIYPSDFLPFTRRPLLLVIDNENSKAFKVIAEASKGESVAMLLSPSRLPPIASDFSHSSNGSLFTMFLTAPLQSFCLLLGFSGTDIDLDLYNKAETLLSSSLNNWGMALASSDTLDPVWGQVLGDPFIRRLLLRFIFCQTVLTLYAPVYNQNEFLPTCVPSLPTLVLPPSYTYQSVILHLASIFSATKHFIFSEDVSPETISTNVDQL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01638 570 Pfam Protein SCAI 348 508 IPR022709 GO:0003714|GO:0006351
Vifa4g01638 570 Pfam Protein SCAI 21 341 IPR022709 GO:0003714|GO:0006351
Vifa4g01638 570 PANTHER PROTEIN SCAI 3 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01638 Vifa-Chr4 471069447 471075531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01638 - - gmx:100810202 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01638 4 471069447 471075531 Vifa4g01638 4 471069447 471075531 ECH