Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01618 ATGGACATTGAAGAATCTGTTAAGAACAAAATACCTTGGGATGGAACTCTCTCTTTAAATGATTTTACTCTTTCTGCTGCTACATTTTCTGACAAGTGGAAAATGTTTAATCCATCCTTTCCTCCATATCTCTGGACCACTTGTCCAAAACATCATTTGGGTTCTCCTAAGGTGGAAGGATTCTTATCACTTGAGAATGTGTGCCTTGTCAAATCCAGTGAGGTAGAAGAGAGCAATAGAAGTCTTGCATGGAAAGAAGAAAGCAACCTCTCAGAGGCAGAAGAGCCTTTTGATGATGCAACTTTAGTTTGTCCAGAGTATGAAGTAAACCACTATGATTTTCACATTATATACAGTCCTTCATATAAAGTTCTGGTGCTGTACTTCCGTTCGTATCATAGCGATGGACAACCTTTGCCCTTCAGTGAATTTGAAAAGGACCTTCCTGGTCATTCTGCAGAGTTGCGTCTAGAATCGAAATGGACATTTATAACCCAAGAGGAACACCCATATTTGAATAGGCCATGGTACAAGCTACATCCTTGTGGGACTAGTGAATGGATGAAACTACTCCTATGTCGTGAGACATCTTTGAATAAAAACTTCATTGAACAATATTTAGTCTCTTGGTTTTCCGTTGTCGGGCAAGTTGTTGGTCTTAAAACTCCTCTGGGAATGCTGGATAATATAGTTTCAAATAATTCTTAA 708 0.3884 MDIEESVKNKIPWDGTLSLNDFTLSAATFSDKWKMFNPSFPPYLWTTCPKHHLGSPKVEGFLSLENVCLVKSSEVEESNRSLAWKEESNLSEAEEPFDDATLVCPEYEVNHYDFHIIYSPSYKVLVLYFRSYHSDGQPLPFSEFEKDLPGHSAELRLESKWTFITQEEHPYLNRPWYKLHPCGTSEWMKLLLCRETSLNKNFIEQYLVSWFSVVGQVVGLKTPLGMLDNIVSNNS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01618 235 Gene3D - 57 221 - -
Vifa4g01618 235 Pfam Autophagocytosis associated protein, active-site domain 51 223 IPR007135 GO:0019787
Vifa4g01618 235 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 9 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01618 Vifa-Chr4 466892655 466894117 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01618 K17888 - gmx:100808589 371.318