Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01598 ATGACTTCAAATTCTAGACCTACTAATAGCTACTCTATCAAAACGGTGGTCGTTTTGGTTCAAGAGAACCGTTCATTTGATCACATGTTGGGTTGGATGAGGTCCTTAAATCCCAAAATTAATGGTGTTACTGGTTCTGAGTCAAATCCAATTTCAACGTCCGATCCCAACTCAAATCGGGTTCAATTCAGGAACCAGTCCATCTATGTTGACCCAGACCCTGGTCACTCGATCCAAGACATTTACGAGCAAATTTTTGGAGAACCATGGAACGAAGCCTCGGAAACAAAGAAATTGCCGCCAATGATGGAGGGCTTCGCTCAAAATGCAATGAGACAAGAGAAACCAAAAGAGGCAACGACATTGACAATGACAGAGGCCGTTATGAATGGGTTTAAACCGGATCTGGTTCCGGTTTACAAAGAGTTAGTTAAAGAGTTTGCAATTTGTGACAGTTGGTTCGCTTCGGTACCTGCATCAACCCAACCAAACCGGCTCTATGTGCATTCCGCCACGTCACACGGGTTAACTAGCAATGACCCTTATAAGCTAATTGGAGGGTTACCTCAAAAGACAATATTTGATTCTTTGGATGAAAATGGTTTCAATTTTGGGATCTATTATCAGCAACCACCATCCACACTTTTCTACAGGAATCTTAGGCAGCTGAAATACATAGATAACTTTCATGAATACGGATTAACATTCAAGAAGCATTGTGAAGAAGGGAAATTACCAAACTACGTGGTGATAGAACAAAGATTTTTCGACCTGCTCTCAATACCTGCAAATGATGATCATCCCTCTCATGATGTTGGAGAAGGACAAAAATTTGTAAAAGAAGTGTATGAAGCACTAAGAGGCAGTCCACAATGGAATGAAATGTTGTTTGTGATTACTTACGACGAACATGGAGGATTTTACGATCACGTGCAAACACCAGTGGACGGAGTTCCTAGTCCAGATGACATTGTTGGTCCTGAGCCATTCAACTTTAAGTTTGATAGGCTTGGTGTTAGGGTTCCAACCATCTTTATTTCTCCATGGATTGAGCCGGGGAAAGTGTTGCATGAACCTTCTGGACCATTTCCAACATCACAATATGAGCATTCATCTATACCAGCAACTGTGAAGAAGATATTTAATCTCCCTAATTTTTTGACAAAGAGGGATGCATGGGCTGGAACATTTGAGAGCCTTTTAACTCTAACCAGCCCGCGAACTGATTGTCCAGAAAAATTGGCCGACCCAATTAAACTACGAGAGAGGGCTGCTAAAGAACGAGCCAAGTTGAGTGAATTTCAGGAAGAATTGGTACTAATGGCAGCAACTCTAAATGGAGATCATAGAAAGAGTATATATCCGGACAAGTTAGTCGAGAACATGTGTGTTTCTGATGCAGTTAAATATGTTGAGGACGCATTCAATACTTTCTTGAATGAGTGTGGAAAAGCAAAGAAAAATGGAGCTGATGGATCTGAAATTGTTGATTGTGCCAATTCATGTAGTACACCACCAAATTCCAAAAGTTTCTTTCACAAAATGTTGTCTTGTGTAACCTGTGATTGA 1569 0.4085 MTSNSRPTNSYSIKTVVVLVQENRSFDHMLGWMRSLNPKINGVTGSESNPISTSDPNSNRVQFRNQSIYVDPDPGHSIQDIYEQIFGEPWNEASETKKLPPMMEGFAQNAMRQEKPKEATTLTMTEAVMNGFKPDLVPVYKELVKEFAICDSWFASVPASTQPNRLYVHSATSHGLTSNDPYKLIGGLPQKTIFDSLDENGFNFGIYYQQPPSTLFYRNLRQLKYIDNFHEYGLTFKKHCEEGKLPNYVVIEQRFFDLLSIPANDDHPSHDVGEGQKFVKEVYEALRGSPQWNEMLFVITYDEHGGFYDHVQTPVDGVPSPDDIVGPEPFNFKFDRLGVRVPTIFISPWIEPGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPNFLTKRDAWAGTFESLLTLTSPRTDCPEKLADPIKLRERAAKERAKLSEFQEELVLMAATLNGDHRKSIYPDKLVENMCVSDAVKYVEDAFNTFLNECGKAKKNGADGSEIVDCANSCSTPPNSKSFFHKMLSCVTCD 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01598 522 SUPERFAMILY Alkaline phosphatase-like 158 384 IPR017850 -
Vifa4g01598 522 FunFam Non-specific phospholipase C1 244 429 - -
Vifa4g01598 522 FunFam Non-specific phospholipase C1 4 190 - -
Vifa4g01598 522 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 6 482 IPR007312 GO:0016788
Vifa4g01598 522 Gene3D Alkaline Phosphatase, subunit A 245 428 IPR017850 -
Vifa4g01598 522 Gene3D Alkaline Phosphatase, subunit A 3 185 IPR017850 -
Vifa4g01598 522 Pfam Phosphoesterase family 13 384 IPR007312 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01598 Vifa-Chr4 462171409 462173393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01598 8 518 Acyl Lipid Metabolism Gene Families AT3G03530 65.226 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01598 K01114 - gmx:100805391 899.042