Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01582 ATGGCTACACCGAAACAACACGTTGAAGAGATACGGAGAACTAAGTTCTCTATTGGCGGGAAACCTAATCCATTGACTGAAGATCTTCATCACGCTGTCAAGAATCTCTCCGCTGAACTTTATGCTAAAGATGTTCATTTCCTCATGGAGCTTATTCAAAATGCTGAAGACAACCATTATATTGACGGAGAGAGTCCAACACTAGAGTTTGTCATAACTTCTGATGACATTACTGGTACTGGTGCGCCAGCCACATTACTTATTTTCAATAATGAAAAGGGTTTTTCTCCAAAAAACATTGAGTCCATCTGCAGTGTTGGACGATCAACAAAGAAAGATAATAGGAACAGTGGTTACATTGGAGAGAAAGGTATTGGTTTCAAGAGCGTGTTTCTTGTTACTGCTCAGCCTTACATTTTTAGCAACGGATATCAGATAAGGTTCAACGAGAGGCCTTGTCCAAATTGCAGAATTGGATATGTAGTTCCCGAGTGGGTTGAGGACAAGCCAACCCTCGTGGACATAAAGAAGATATATGGTGCTGGTAAAGATTCTCTTCCAACTACAACAATTATCTTGCCTTTGAAGCCGGGTAAAGTCAAACCTGTTAAAATGCAGCTCTCAAGCATTCAACCGGAAGTTTTATTGTTCCTTTCAAAAATCAGACACCTTTCTGTCAGAGATAATGATGAGGACTCCAAACAGAAGACTGAAACTTCCGTATCTATTTCAAGCGAGATTAACTTTGTGACAAGGAAAAACATGAATGCCGAGTCTTATACAGTCCATCTATCTGCCGGGAAAAATAGTACTGACGAAAAGGAATGCAGTTACTACATGTGGAAGCAGAAGTTTCCAGTCAAGTTGAAAAATGTGGTGGAAAGGAGAAGGGGTGTGAAAGAGTGTGTTGTGACATTGGCCTTCCCACATCAGGAGAGGCTTCACAAGGATAAGAGCTTACCAGGGGTTTATGCATTTCTTCCTACAGAGATGGTCACTTATTTTCCTTTCATAATTCAAGCTGATTTTGTTCTTGCCTCGTCAAGGGAGACAATTCTCTTCGATGATAAGTGGAATAAAGGGATACTTGAATATGTTCCATCAGCTTTTGTAGATGCATTCAAAACACTTATCACTGGTTCAGATGAAGTTCCAGTCTCCAGCTTGCCATATATGCTCAAGTTCCTTCCAGTTTGTAGTTCTCCTTTTGAAAACTTCAATCAGTTGAGGCAGAAAATCAGATCAAAACTGACTGAAGAAAAGATCTTACCTATTGAGACATTCACAAACCAGAAGCACTTCTATAAGCCTCGCGAAGTTAGCAGACTACTACCTAGCTTTTGGAATATTTTGACAAAGGCTCAGAAGGAGGGAGTGTACTTGCTTGATCTGTCTTCTCATGATGGGATGAAAATATTGAGTTCTTCATTTGATAAAACCGAGTATGAATGCGTACTCAATTTTTTAGGGGTGAAACTGGTGAATTTTGATTGGTATGCAAAGTGCATCCAGAGTTCAAATCTTGTGGACGGAGTATCAGAAAATATCTATCTTGAGCTTTTAGTGTTTGTTTCTAGATTTCCGTCAAAGCTTGCTGATGATATTCCATTGATTAAATATGTGGCTTCTGATGGGATTCTGTCTTTTTCCAGTCTTAATGAATGCAGGCATCTAGGTGTTGGTGCCAGGTGTTTAGTACTAGCATCCTCAACTAGGAATTGTCCTTGTTCTTGGCTGATCAATTGGAACAATATATTTGCATGCGTGACAAACCAGTTTTTTATGCCCGAAAGCACACAACAAGCTCTCTTCCAATCGCGCGATAAGCTTCATTTGTTGGGATGGCTAAGAACTGTTAATATCCGTACTCTAGATGTGTATAGTTTTGCATTTGCTCTCTGCAGTTCTATTAATAATAACTGCAAGCTCGCCATTGCTTATGCTCATTTCTTATACCACTCTTTCTCAAAGGGTTATTTGTCAAGTCATGAGGTTAATGCTCTACGTAGTTCTATTCCACTTGTGGACAAGTTTGGACGTATAACTAAAAGCATAAACGGAGTTCTTCTTCCTGCAAATGTGAGCAAATGGGCAGATTTGATTGGTTCTAATCCATGGAGAAATGAAAATTATGTTGAGTTAGGAAAGGCTTACCTAAATGATTCTTCTTATGCTGGCCAATATACAGATTCAGGGAAGCTTATTGAATTCCTCAAAACCTTTGTTGGAGCTTCTGACATACCTTATATATCTCCTCCAAATGCTGGCTTTTCAGCAGCGGATACACCACTTACCAAAGACAATGCCTTTTTACTTTTAGATTGGATTCGGGAGCTGAAGAAAAGGGGAGTTGGCCCACCAAAGAAGTTCTTGGAATGTATAAAAGGGGGCAGATGGCTTAAAGTTACAGGCAATGTATACATGCCCCCTTCTAAGTCATTCTTAATTGGCTCATCATTGGGAAAGCTTTTGCAGAGTGGTTCAGTTCTTGTTGACATTCCCCTGATTGATGAGATGTTCTACGGGGATAGAATAAATGAATACAAAGAGGAATTGGAAACGGTTGGAGTGATGCTCAATTGTGAGGAAGCATGTGAATTCATTGGAAGAGAGCTAATGTCTCGAGCAGCTTCTTTCTCTTTACATAGGAGTCATGTTCTTTTGATGCTTAACTTCATCCAATATCTCAAGAAAAGTCTTCTTCCTCTGGACAAATTTGTCAACAGCATCAAAGAAGGGACTTGGCTTAAGACTTCTTGGGGCTTTAGGTCTCCTGTGGGATCTGTCTTGAATGATTCCGGATGGCAAGTTGCGTCACAAATTAGCAACATCCCTTTCATTGATCAATCTTATTTTGGTAAAGAAATATATAGTTACAAAGAAGAGCTCAAGTTGCTAGGAGTGATAGTTGATGCAAGTGGAAATTACCAAGTTGTCGTTGAGCATTTAAAATTACCCTCAGATTTGGCCTCTTTGACAGCTGAAGCTTTTCTTTTGATAATGGAATGCATCAGGCACTCAAATACCCCTATTAATCTCTTAAATTTACTTAAGGGAAAAAACTGCTTGAAGACAAACATGGGTTTCAAAAAACCAGGTGAATGTTTCTTGTATGACCCAGTATGGGGCTGCATTTTGGAGGTATTTGATGATCTTCCTGTTATTGATCATAAATTTTATGGGGAGAAGATTTTCAGTTTCAAAGATGAATTGAAGCAAACAGAGGTGTTGGTTGATTTTATGGATGCCATCAAAAAATTTGCTAGTCTCTTCGAACGAAAGGCATCGGAAGCTTCAATTAACCAACAAAATGTCATCTCATTTCTCTCTTGTTGCAGGCTGCTGGAGGGAACTGACTATAGTTTTCCTTCTGAATTCAAAACCACCATACGTAAATCGAAGTGGTTGCATACTAGTGTTGATGGTTTTAGGTGCCCAAAACAATGCATTTTATATGGTCCGGAGTGGAAATTGATATCTTCTATAACTTGTCTCCCTTTCATTGACTACAGTGATAAATGTTGTGGTTTGGGAATATATGAGTACAAGGCAGAGCTGAAGAGCATTGGCGTTGTCACGGAATTCAAAGATGGATTGAGGTTTGTGCCCGAATGTCTGAATTTTCCTTCAGATCCCTCCACCATTAGTCCTGAAAGTGTATTTTCTTTTCTGGAATGCGTCCAACTTCTAATGCAAGATAACAAGCTTTCCTTCAGCGATGATTTCAGAAAAAGATTGTCCGAATATTGGTTGAAGACACATGCTGGTTATAGGCCTCCAGAGAAGTGTTTGTTGTTTGATTCCAAGTGGAGTTCTTTCTTGAATCCAACTGATGGGCCTTTTATTGATGAAAATGTTTATGGACCTAATATTGCATCTTTCCGGAAAGAACTCAATGCAATAGGAGTCATTAGTGAAGTTGAGAAAGGGTGCTCCTTGCTTGCCAGTCACATTGAGTCTCTATCCGATCATGATACCATTGTGAAAATATATAAGTACTTATGTGAACACAACTGGAAACCTGAGGAGAGAGCTGCAAGAAAGGTTTGGATTCTGGATGGAAACAAAGGTGGCAAGTGGGTTGATTCTAAAGAGTGCATGGTTCATGACCCTGCTAAACTTTTTGGTTCAAAATTTTATGTTCTAGATGATATCTATGATGACAGCAGTATTCTTCTTTTTTTCTACTTTGCAATGGAAATCAAGAATAAGCCTTCGCTAGAAGATTATGTTGACCTTTGGAATGAATGGGGGAGGTCAATAGAGCAATTGTCATATGATGAGTGCTGCAGGTTCTGGACGTCTATCTCGAAACATCTGAGCACAAATGAAGAGAAAAAACTTGCAGGGAGTCTGATGAAACTACCAACAACATCAGGAAATAATGAAATATTTCTGGTAGATAGGGAAGATGCTTTTATCCCTGATAACCTTCATATGAAGAAGCTTTTTGAGAAGGAAAAGGTTTTTGTATGGTATCCTCAGTATAACATGACACCATTGTCCAAGTGTAAACTATCTGAGATTTACAGAAAAATTGGTGCTAGAAATATCTCTGAATCACTATCCAAAGAAGAATCATCCTTAGTGAATGATGGCGATAAACTGAAGTATGTTGATCCAAATAACATTTTCAACTTGAAGGGGTTGGTTAAGCTTATTCTTGGTTTTCTTGCATGTTCTAGCCTAAAAATGGAACCTAAAAAGAGACATGAAGCTGTTCAAAGTCTTATCAACTTGAGTTTCCACGAAACAATGGAGCCACTCGATGTAAGCTATAGTTTATCACTATCATCAGGGGACATCATTACCAAGAAAGCAAACAAAAGGGTACGTTGGGAAAGTCAAAGTTGCAACTTTATCATCCAAAAGTCGGATGGAGTTCCTGGTGATTCATTGAAATATGCTTCAAATTTCTCTGAAGCAATATCTGAGGGTGTTTTGTGTGAGAACCATGATTATGTCCCTGCACTGTCTGAACTAATCACATTGGGTTTTGTTATGAAATTCAAGAATGAAGAAGTTGATTTTCTAATGGAATCCAAGAATCTGCAGATTGACTTTGAAGACGAGGAGTTCCTCAGTTCTGCCTTCCCTTTTGACTAA 5106 0.3895 MATPKQHVEEIRRTKFSIGGKPNPLTEDLHHAVKNLSAELYAKDVHFLMELIQNAEDNHYIDGESPTLEFVITSDDITGTGAPATLLIFNNEKGFSPKNIESICSVGRSTKKDNRNSGYIGEKGIGFKSVFLVTAQPYIFSNGYQIRFNERPCPNCRIGYVVPEWVEDKPTLVDIKKIYGAGKDSLPTTTIILPLKPGKVKPVKMQLSSIQPEVLLFLSKIRHLSVRDNDEDSKQKTETSVSISSEINFVTRKNMNAESYTVHLSAGKNSTDEKECSYYMWKQKFPVKLKNVVERRRGVKECVVTLAFPHQERLHKDKSLPGVYAFLPTEMVTYFPFIIQADFVLASSRETILFDDKWNKGILEYVPSAFVDAFKTLITGSDEVPVSSLPYMLKFLPVCSSPFENFNQLRQKIRSKLTEEKILPIETFTNQKHFYKPREVSRLLPSFWNILTKAQKEGVYLLDLSSHDGMKILSSSFDKTEYECVLNFLGVKLVNFDWYAKCIQSSNLVDGVSENIYLELLVFVSRFPSKLADDIPLIKYVASDGILSFSSLNECRHLGVGARCLVLASSTRNCPCSWLINWNNIFACVTNQFFMPESTQQALFQSRDKLHLLGWLRTVNIRTLDVYSFAFALCSSINNNCKLAIAYAHFLYHSFSKGYLSSHEVNALRSSIPLVDKFGRITKSINGVLLPANVSKWADLIGSNPWRNENYVELGKAYLNDSSYAGQYTDSGKLIEFLKTFVGASDIPYISPPNAGFSAADTPLTKDNAFLLLDWIRELKKRGVGPPKKFLECIKGGRWLKVTGNVYMPPSKSFLIGSSLGKLLQSGSVLVDIPLIDEMFYGDRINEYKEELETVGVMLNCEEACEFIGRELMSRAASFSLHRSHVLLMLNFIQYLKKSLLPLDKFVNSIKEGTWLKTSWGFRSPVGSVLNDSGWQVASQISNIPFIDQSYFGKEIYSYKEELKLLGVIVDASGNYQVVVEHLKLPSDLASLTAEAFLLIMECIRHSNTPINLLNLLKGKNCLKTNMGFKKPGECFLYDPVWGCILEVFDDLPVIDHKFYGEKIFSFKDELKQTEVLVDFMDAIKKFASLFERKASEASINQQNVISFLSCCRLLEGTDYSFPSEFKTTIRKSKWLHTSVDGFRCPKQCILYGPEWKLISSITCLPFIDYSDKCCGLGIYEYKAELKSIGVVTEFKDGLRFVPECLNFPSDPSTISPESVFSFLECVQLLMQDNKLSFSDDFRKRLSEYWLKTHAGYRPPEKCLLFDSKWSSFLNPTDGPFIDENVYGPNIASFRKELNAIGVISEVEKGCSLLASHIESLSDHDTIVKIYKYLCEHNWKPEERAARKVWILDGNKGGKWVDSKECMVHDPAKLFGSKFYVLDDIYDDSSILLFFYFAMEIKNKPSLEDYVDLWNEWGRSIEQLSYDECCRFWTSISKHLSTNEEKKLAGSLMKLPTTSGNNEIFLVDREDAFIPDNLHMKKLFEKEKVFVWYPQYNMTPLSKCKLSEIYRKIGARNISESLSKEESSLVNDGDKLKYVDPNNIFNLKGLVKLILGFLACSSLKMEPKKRHEAVQSLINLSFHETMEPLDVSYSLSLSSGDIITKKANKRVRWESQSCNFIIQKSDGVPGDSLKYASNFSEAISEGVLCENHDYVPALSELITLGFVMKFKNEEVDFLMESKNLQIDFEDEEFLSSAFPFD 1701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01582 1701 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 31 199 IPR036890 -
Vifa4g01582 1701 Gene3D - 14 214 IPR036890 -
Vifa4g01582 1701 PANTHER WU:FJ29H11 2 1693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01582 Vifa-Chr4 459757350 459764141 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01582 - - gmx:100800765 2301.55