Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01481 ATGTATGCTGATCGGGTGGAAAATGGAGCGAGGAGGTCGGTGAAGGAACGTCTTGATGGGAGCATCGGTGTATCTACTCGGCAGCAACGCCAAGTTAGCGGCAAGAGGGCGAGACAGGATGACAAGTGGGAACATGATCTGTATGATGATGATGAACAACCCCAGACCACTAATCGCAAAGTTACTGGTCAAGATCTTCGTCATAAGCTTCAAAAGAAAGGTCTTCAACCTGCAACTAGGCCTGGAAAAAGTTCGGCTCCAAACATCCGAGATCTCCGCGAAAGACTATCAGGGACAATGAATTCACAACCTAAAAACTCCGATCCACCGAAGTCAAAAGTGATTGCTAAACCGAGCAATACAAGTGTTGGTGCCGAGGCTCCTGCAGTCAAAAGACCAGCTAACCCAGCTCCTAAGAAGGCACGGAAGGCTGAAACTACAGTGGATGATTTTTTGCTGTCCTTGGGTCTCGAAAAGTATCTCATAACTTTTCAAGCTGAAGAAGTTGATATGGCAGCTCTCAAACATATGAATGATGAGGACCTCAAGGTCATGGGTATACCAATGGGGCCCAGAAAGAAGATACTTTTAGCATTGGAGTCAAAACTCTGA 612 0.4641 MYADRVENGARRSVKERLDGSIGVSTRQQRQVSGKRARQDDKWEHDLYDDDEQPQTTNRKVTGQDLRHKLQKKGLQPATRPGKSSAPNIRDLRERLSGTMNSQPKNSDPPKSKVIAKPSNTSVGAEAPAVKRPANPAPKKARKAETTVDDFLLSLGLEKYLITFQAEEVDMAALKHMNDEDLKVMGIPMGPRKKILLALESKL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01481 203 PANTHER SCP160 106 199 - -
Vifa4g01481 203 FunFam DDHD domain-containing 2 146 203 - -
Vifa4g01481 203 SUPERFAMILY SAM/Pointed domain 145 200 IPR013761 -
Vifa4g01481 203 CDD SAM_superfamily 148 200 - -
Vifa4g01481 203 Gene3D - 145 203 IPR013761 -
Vifa4g01481 203 SMART SAM_4 140 203 IPR001660 GO:0005515
Vifa4g01481 203 MobiDBLite consensus disorder prediction 1 144 - -
Vifa4g01481 203 MobiDBLite consensus disorder prediction 33 72 - -
Vifa4g01481 203 MobiDBLite consensus disorder prediction 95 119 - -
Vifa4g01481 203 MobiDBLite consensus disorder prediction 1 18 - -
Vifa4g01481 203 Pfam SAM domain (Sterile alpha motif) 146 200 IPR001660 GO:0005515
Vifa4g01481 203 ProSiteProfiles SAM domain profile. 143 203 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01481 Vifa-Chr4 436859805 436864996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01481 38 202 Glycosyltransferase AT3G07170 58.434 4.18e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01481 - - gmx:100784706 270.781