Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01471 ATGGCACAAGGAGAGCTTTTGGTACTTTTCTTTTTGGCATTGTTGTGCAAGGCGATTGCTATAAAATCACAACCAAGCACAAAAGAGCCTATTATTAGCACAATTGATGGAAGTTTTTGCTTGAGTTGGAGATTGGCAGTGGAAACAAATAATGAACTTCCATGGAGAACAGTTCCAAATAAGTGTTCACAATATGTTGAAGATTACTTGATCCATGGACAGTATGAAAGGGACCTGGAGTTGATAATGGAACAAGCTTTGGATTATGTGAATGGTATATCCATTGTTGGAGATGGCATGGATGCTTGGATTTTGGATGTTGATGACACTTGCCTCTCCAACATCTATTATTACAAAAGCAAGAATTATGGGTGTGAGCCATATGATCCAGCAGCTTTTAGGACATGGGCAATGAGAGGATGGTGTACAGCCGTTCCTCCTGTATTAAGGTTATTTAACAAGTTGATAGATAATGGATTTAAGGTAATACTCCTTACTGGAAGAGATAAAGAGATACTTGGTCAAGTTACTATTGACAACTTGCATAATCAAAAATTTATTGGATATCACCGACTCATTATGAGGACACCTGTATATAAAGGAGAAAGTGCAGTAACATATAAATCAAATGTAAGGAAGAATCTCGAAGTGGAAGGTTATAGAATATGGGGTAATGTGGGAGACCAATGGAGTGATCTCCAAGGATACTCTTGTGGAAACCGTACATTCAAACTTCCCAATCCTATGTATTTTGTTCCCTAG 762 0.3793 MAQGELLVLFFLALLCKAIAIKSQPSTKEPIISTIDGSFCLSWRLAVETNNELPWRTVPNKCSQYVEDYLIHGQYERDLELIMEQALDYVNGISIVGDGMDAWILDVDDTCLSNIYYYKSKNYGCEPYDPAAFRTWAMRGWCTAVPPVLRLFNKLIDNGFKVILLTGRDKEILGQVTIDNLHNQKFIGYHRLIMRTPVYKGESAVTYKSNVRKNLEVEGYRIWGNVGDQWSDLQGYSCGNRTFKLPNPMYFVP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01471 253 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 34 252 IPR005519 -
Vifa4g01471 253 CDD HAD_VSP 66 252 - -
Vifa4g01471 253 NCBIfam plant acid phosphatase 29 253 IPR010028 GO:0003993
Vifa4g01471 253 SUPERFAMILY HAD-like 82 250 IPR036412 -
Vifa4g01471 253 Gene3D - 34 253 IPR023214 -
Vifa4g01471 253 PIRSF VSP 5 253 IPR014403 -
Vifa4g01471 253 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 10 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01471 Vifa-Chr4 434467307 434469894 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01471 - - lang:109363534 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01471 4 434467307 434469894 Vifa4g01471 4 434467307 434469894 ECH