Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01425 ATGGCCTCTTATAGGCCTTTCCCTCCTCCACCGGCGAGTCAAAACCCTATCGCACCACAACCACCAAGAGGTGGTGGTAATAATAATTGGGGTGGTTACGGTTACGGTGGCGGCGGCGGCGGCGGCGGTGGTGCTGGTGATTCTTCTACTTCATTTTCCCAAATACCGAATTCAAATTATCAACATCATCACCATCAGCACCAACAGCATCACCATGCTCCTCCTCCTCCACCGCCTTCGAATTACTATCCATATCCACCACCGCCACCTCCTCCGCCTGATAATTCATATCAGCCACCGCCTCCACCACCACCCGCTACTATGTACTATCCTCCTTCTAATAATCAATACAATCATCAACAACAACCACCACCTCCGCCACCGTTGTCCCCGGGTTCTTCCATGCCGCCTCCACCACCTCCTCCTCCAACCTCCTCGCCTCCGCCTGAAAGGGCAATCAATAAAGAGTCATCTGGCAGGCACGAAAGAGTTTCACATAGACAGCAGCAGAAGCCTTCTCACCCTCCGAGGAAGGTTGAGACGGATGAAGAGAAGAGGATGAGGAAGAAGAGGGAGTTTGAGAAGCAAAGGCAAGAAGAAAAACATAGGCAGCAGAAGAAGTTGAAGGAATCACAGAATAGTGTTCTGCAGAAGACTCAGATGGTGTCGTCTGGGGGAGCTGGAAAGGCGCATGGTTCTATTGCGGGGTCTCGAATGGGAGAGAGGAGAACTACTCCCTTGTTGAGCAGTGAGAGGGTTGAAAATAGGTTGAAGAAGCCGACCACTTTTTTGTGTAAGCTCAGATTTCGAAATGAGCTACCGGATCCAACTGCACAACCCAAGCTAATGGCATTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCTCTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAACCTGATCTTGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCTAGTGTCCGCCCGCCTCTTGCTCCAGAAGATGAAGATTTATTGCGAGATGATGAAGCTGTTACTCCTTTGAAAAAAGATGGTATTAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTAGCTTGGCTTGTTAAAACACAATATATATCTCCTTTAAGCATGGAATCGGCCAAACAGTCCTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGAGGAAGGGAGGTCGCAATCTTTTGGAAAATCTTAACAACAGGGAAAGACAAATTAGGGAAATTGAAGCATCATTTGAAGCAGCCAAGTCACGCCCTGTTCATGCAACTAAAAAAGATTTGTATCCTGTCGAGTTTATGCCATTGGTGCCTGATTTGGATAGGTATGATTATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCAACGGCTGACTCAGAAATGTACAGGAAGTTGGACAAATCTGTTTGTGAAATCTCTGAATCGAGGGCAGTTATGAAAAGTTATGTTGCAACAAGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCATACATGGTCCCAACACCAGGAGAGTTGTCGAAGGATATATATGATGAAGATGAAGAAGTCAATTATTCTTGGGTTCGCGAGTATCATTGGGATGTTCGAGGCGACGATGCACATGATCCCACAACATTCTTAGTTGCATTTGATGAGTCAGAAGCTCGTTATTTGCCTCTTCCAACTAAACTTGTTTTAAGAAAAAAGAGGGCCACAGAAGGAAGATCAGGTGATGAGGTTGAACAATTTCCAGCTCCCTCCAGAGTAACTGTGAGGAAAAGATCAAGCGTTGCTGCAATTGAACGGAAAGATTCCGGGGTTTTTACAAGCTCAAAGGGAAATTCGTCAAAGAGCCTAGAAATGGACGACGATCTCGACGACGACCAAAGAGATGCAGAGCACCAGGATAACTTCCAATCTAGTGGAGCAGAAGATGACATGTCTGATTGA 1968 0.4548 MASYRPFPPPPASQNPIAPQPPRGGGNNNWGGYGYGGGGGGGGGAGDSSTSFSQIPNSNYQHHHHQHQQHHHAPPPPPPSNYYPYPPPPPPPPDNSYQPPPPPPPATMYYPPSNNQYNHQQQPPPPPPLSPGSSMPPPPPPPPTSSPPPERAINKESSGRHERVSHRQQQKPSHPPRKVETDEEKRMRKKREFEKQRQEEKHRQQKKLKESQNSVLQKTQMVSSGGAGKAHGSIAGSRMGERRTTPLLSSERVENRLKKPTTFLCKLRFRNELPDPTAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEDLLRDDEAVTPLKKDGIKRKERPTDKGVAWLVKTQYISPLSMESAKQSLTEKQAKELRERKGGRNLLENLNNRERQIREIEASFEAAKSRPVHATKKDLYPVEFMPLVPDLDRYDYQFVVAAFDNAPTADSEMYRKLDKSVCEISESRAVMKSYVATSSDPANPEKFLAYMVPTPGELSKDIYDEDEEVNYSWVREYHWDVRGDDAHDPTTFLVAFDESEARYLPLPTKLVLRKKRATEGRSGDEVEQFPAPSRVTVRKRSSVAAIERKDSGVFTSSKGNSSKSLEMDDDLDDDQRDAEHQDNFQSSGAEDDMSD 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01425 655 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 234 655 IPR007133 GO:0006368|GO:0016570|GO:0016593
Vifa4g01425 655 MobiDBLite consensus disorder prediction 210 226 - -
Vifa4g01425 655 MobiDBLite consensus disorder prediction 118 149 - -
Vifa4g01425 655 MobiDBLite consensus disorder prediction 72 110 - -
Vifa4g01425 655 MobiDBLite consensus disorder prediction 46 62 - -
Vifa4g01425 655 Coils Coil 179 199 - -
Vifa4g01425 655 SUPERFAMILY Formin homology 2 domain (FH2 domain) 92 268 - -
Vifa4g01425 655 MobiDBLite consensus disorder prediction 1 18 - -
Vifa4g01425 655 Coils Coil 403 430 - -
Vifa4g01425 655 MobiDBLite consensus disorder prediction 577 655 - -
Vifa4g01425 655 MobiDBLite consensus disorder prediction 1 254 - -
Vifa4g01425 655 MobiDBLite consensus disorder prediction 154 209 - -
Vifa4g01425 655 Pfam Paf1 263 641 IPR007133 GO:0006368|GO:0016570|GO:0016593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01425 K15174 - gmx:100800148 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01425 4 422496300 422501083 Vifa4g01425 4 422496300 422501083 ECH