Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01416 ATGTATAGAGCCACAGCTTCATCTCTCAAAAGGCATCTCAAGGGCCGTGGTGGAAACTTGGGAGGAACTAGGTTTAATACTTCAAGTGCCGTAGCTGCAAAGGTTTCCTCTGGTGGTTTGTTTAGCTGGCTTACCGGGGAGCGTTCGAGTTCTCTTCCCCCTCTTGATACGCCACTTAGTTCTGTTGTTCTTCCTGATCCTTTGCCTGATTATGTTGAACCAAGCAAGACCAAGATCACTACTCTTTCTAATGGACTCAAAATCGCCTCAGAGACCTCGTCGAACCCTGCAGCCTCAATTGGGTTGTATCTCGATTGTGGTTCCATCTATGAGACACCGTTGTCAAGTGGGGCTTCACACTTGTTAGAGAGAATGGCTTTCAAGAGCACGGTTAACCGTAGTCATTTTCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGTAATATCGGAGCCTCGGCCTCTCGAGAACAAATGGGTTACACATTTGACGCTTTAAAGACTTACGTTCCACAAATGGTTGAATTACTGGTTGACTGTGTAAGGAATCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCGAAAGGTGAAAGCAGAGCTTGGAGAACTCTCAAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTTTCCTCTTTTGGCTCCCGAAGAAGCACTGAACAGATTGGATGGTCCCAGTTTAGAGGAATTTGTTGCTGAAAATTATACAGCTCCTAGAATGGTACTTGCTGCATCTGGGGTTGAGCATGAAGAGCTTCTATCAGTTGCTGAGCCACTTCTTTCTGACCTACCAAGTGTTCCCCGCCCCGAAGAACCAAAATCTACCTATGTTGGAGGTGATTTCCGTCGTCACGGTGAAGAAGGGGCCGCACATGTTGCTATTGCTTTTGAAGTGCCCGGTGGCTGGCAACAGGAGAGAGATGCTATAGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGTTCATTTTCGGCTGGGGGGCCCGGTAAAGGGATGCACTCAAGGCTATATCTTCGCGTGTTGAATGAATACCAACAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGATTATTTGGCATTTACGCAAGCACTAGCCCCGAGTTTGTACCAAAAGCTGTAGATTTAGCAGCCAAAGAACTAATCGCAATTGCATCGCCTGGACAAGTTACACAGGTACAGCTTGACCGTGCCAAAAAATCCACAAAATCTGCAGTTCTTATGAATCTGGAATCTAGAATGATTGCGTCAGAAGATATCGGAAGGCAGATTTTGACATACGGAGAAAGGAAATCTGTGGAACAGTTTCTTCAGGCTGTCGATGAAATCACTTTGAATGATATCACTAAAATATCTCAAAAGATTATATCTTCACCTTTGACCATGGCATCATATGGAGATGTTATTAACGTGCCGAGTTACGAAACTGTGAACCGCATGTTCCATGCGAAATGA 1521 0.4497 MYRATASSLKRHLKGRGGNLGGTRFNTSSAVAAKVSSGGLFSWLTGERSSSLPPLDTPLSSVVLPDPLPDYVEPSKTKITTLSNGLKIASETSSNPAASIGLYLDCGSIYETPLSSGASHLLERMAFKSTVNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAFPLLAPEEALNRLDGPSLEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPSVPRPEEPKSTYVGGDFRRHGEEGAAHVAIAFEVPGGWQQERDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPEFVPKAVDLAAKELIAIASPGQVTQVQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKSVEQFLQAVDEITLNDITKISQKIISSPLTMASYGDVINVPSYETVNRMFHAK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01416 506 MobiDBLite consensus disorder prediction 1 21 - -
Vifa4g01416 506 FunFam Mitochondrial-processing peptidase subunit beta 67 282 - -
Vifa4g01416 506 Gene3D - 291 503 - -
Vifa4g01416 506 Gene3D - 69 279 - -
Vifa4g01416 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Vifa4g01416 506 PANTHER METALLOPROTEASE 70 494 - -
Vifa4g01416 506 FunFam mitochondrial-processing peptidase subunit alpha 291 499 - -
Vifa4g01416 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 305 497 IPR011249 GO:0046872
Vifa4g01416 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Vifa4g01416 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Vifa4g01416 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01416 Vifa-Chr4 419308797 419312395 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01416 K01412 - gmx:100810990 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01416 4 419308797 419312395 Vifa4g01416 4 419308797 419312395 ECH