Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01405 ATGGCAAGTATTCTAGGTAATGCTTCAACCATTGTTACTTCTTGTGCATTCAGGAATGAACCACAGCTATGTAGTAAATTCACTGGAAGCAGTTGTTCCTCAACCCTATGGCTTTCTTGCATTGGCCTCCATGGAAACAAGGGTAGAAAACATTTTCAGATCGGATCCTCAAATGGGCATCCCTTAAATGCTGTTTCTTCTCATGATGGTTTAGCTGCAAGTTCATTGGCCAAAGAAGATGGCCAGCCTCAACAAGTTGAAGAATCGTTTTCCTTTTCAAACTCTGAATCCACAGGGTCAAACCTTAGTATAACTGTTGTTGGAGCTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCAGCACTCTTTGCTCTTTTTTATGAAGATTGGCTACCTGAGAATTTTATTGTGTTTGGGTATGCTCGAACTAAAATGACTGATGAAGAGTTAAGGAACATGATTAGCCAGACTTTAACATGCAGAATTGACAAGAGGGCAAATTGTGCAGATAAAATGGATCAATTCTTGAAAAGATGCTTTTACCATTCTGGTCTGTACAATTCTGAGGACCACTTTCTAGATTTGGATTCCAAGCTGAAAGAGAAAGAGGGTGGAAGAGTTTCAAACAGGTTGTTTTATTTGTCAATACCTCCAAACATATTTGTGGATGTGGTGAGATGTGCTAGCCTCAAAGCTTCTTCAAAGAATGGCTGGACAAGGGTTATTGTTGAAAAGCCATTTGGCCGTGATTCAGAATCATCTAACGAACTAACAAGGAGTTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATCGACCATTACTTAGGTAAGGAGCTTGTGGAGAATCTCTCTGTACTTCGTTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGGATTACATTCGCAATGTACAGGTGATATTTTCTGAAGATTTTGGAACAGAAGGAAGAGGGGGTTATTTTGATAACTATGGGATCATTCGTGATATAATGCAAAATCACCTTGTGCAAATACTAGCACTGTTCGCAATGGAACCACCTGTCAGCTTGGATGCTGAGGACATCAGAAATGAAAAGGTGAAGGTTCTGAGATCAATGAAGCCAATACTTCTTGAAGATGTTGTAGTTGGTCAATATAAGGGCCACAGCAAGGGTGGTAGATCGCATCCTGCTTATATAGATGACCCAACTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCTGCAGCGGCTCTTTTTATTGGTAATGCCAGATGGGATGGAGTTCCTTTTCTCATGAAAGCTGGCAAAGCTCTTCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACACGTCCCGGGTAACTTGTACAAGCGGAACTTTGGAACTGACCTGGACAAAGCTACAAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAGATCAACAACAAAGTTCCTGGTCTCGGAATGAGATTAGACAGAAGTGATCTGAATTTGCTTTACAGTTCAAGGTATCCAAGAGAAATACCAGATGCATATGAAAGGTTACTTTTAGATGCTATTGAAGGTGAACGAAGGCTGTTCATCCGAAGCGATGAACTTGATGCAGCTTGGGCACTATTCACTCCTCTGCTAAAAGAAATTGAAAACAAGAATATTGCTCCAGAGCTCTATCCTTATGGTAGTCGAGGACCAGTTGGAGCACATTACCTTGCTGCAAGGCACAATGTAAGATGGGGAGATCTCGGTGGAGATGATTGA 1767 0.4103 MASILGNASTIVTSCAFRNEPQLCSKFTGSSCSSTLWLSCIGLHGNKGRKHFQIGSSNGHPLNAVSSHDGLAASSLAKEDGQPQQVEESFSFSNSESTGSNLSITVVGASGDLAKKKIFPALFALFYEDWLPENFIVFGYARTKMTDEELRNMISQTLTCRIDKRANCADKMDQFLKRCFYHSGLYNSEDHFLDLDSKLKEKEGGRVSNRLFYLSIPPNIFVDVVRCASLKASSKNGWTRVIVEKPFGRDSESSNELTRSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRDYIRNVQVIFSEDFGTEGRGGYFDNYGIIRDIMQNHLVQILALFAMEPPVSLDAEDIRNEKVKVLRSMKPILLEDVVVGQYKGHSKGGRSHPAYIDDPTVPKGSLTPTFAAAALFIGNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLYSSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKNIAPELYPYGSRGPVGAHYLAARHNVRWGDLGGDD 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01405 588 PIRSF G6PD 87 585 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 Gene3D - 98 272 - -
Vifa4g01405 588 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 92 581 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 274 280 IPR019796 GO:0004345|GO:0006006
Vifa4g01405 588 FunFam Glucose-6-phosphate 1-dehydrogenase 273 582 - -
Vifa4g01405 588 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 287 581 IPR022675 GO:0004345|GO:0006006|GO:0050661
Vifa4g01405 588 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 97 287 IPR036291 -
Vifa4g01405 588 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 101 583 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 PRINTS Glucose-6-phosphate dehydrogenase signature 421 447 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 PRINTS Glucose-6-phosphate dehydrogenase signature 264 292 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 PRINTS Glucose-6-phosphate dehydrogenase signature 334 350 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 PRINTS Glucose-6-phosphate dehydrogenase signature 240 253 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 PRINTS Glucose-6-phosphate dehydrogenase signature 316 333 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 106 284 IPR022674 GO:0006006|GO:0016614|GO:0050661
Vifa4g01405 588 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 274 581 - -
Vifa4g01405 588 Gene3D Dihydrodipicolinate Reductase; domain 2 273 582 - -
Vifa4g01405 588 FunFam Glucose-6-phosphate 1-dehydrogenase 98 272 - -
Vifa4g01405 588 NCBIfam glucose-6-phosphate dehydrogenase 102 582 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01405 Vifa-Chr4 418218107 418223843 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01405 K00036 - gmx:100801945 1023.85