Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01398 ATGAAAGGGGCAATTGATGAGGGAAAGGATATAAGTCCAATGTTCCCTAGGTTGCATGTGAAGGATGCAGAGAAAGGAGGGCCAAAAGCACCTCCAAGGAATAAGATGGCTCTATATGAACAATTTAGCATTCCTTCACAAAGTATTGCAGCAGGAGGACCAGGTTCTGGATCCTTGTTTTCTCTTCCTTTAAGAAACTGCACAGTTCCTACAACATCAAGCCATCTTGGTTATAATGAAAGCATCAAGTTCTGCAGCTCCAAATCCAATGCAATTTCTATTCTATCTGAGAAGACTCAAGCTTATAATTCAAGAAAGATTAACTTAACGAAGTTGACACAAGATAATTACATCAATAGTAGTAAGAGTTCTCTTAAAACACTTGATGGCGAAGATGCGCATATAACTCCCAGTTCTGTTCATGTGAAAAGTTCATTTTATGGTGGCGTCGTCCAAAATGAAAAAGATGAAGACAAACTTGCTCGCTGCAATTTGAGCTTTTCGTTTAAAAGTCTAAATTCATTTGGAAAGGTGATGAATTCATCTGGAGCCATAGGGATGAATTCACCCCAGTTTGGGAAGAACCAAATGGAAGAGCATAAAGATGTGAGTCAAATTGATCGAAAGGCAAAGGAAAAATCCCCTCACTCATTAAATGGTTTTGACGAAACAACAAATGAATCGTCAAACTCATCGGCTAAATATACAAATTCTAAATCAATGAAAGAAGAAATTAAAAGTGTTTCAGTAGATAGCTTGAAAGCATTGCAAGGTAGCAATGGTCATAGACATGAAGATCATGCAGCTTTTGTAGACAAAAACAACTTCAGAGATCATTGCATGGAGAAGCCAGCAATGAGTGATGTCCAAAAATGTTCTGGTGAGTTAGAAATCGGTAGAAGGTCCTTACATGGAAAGGGAGAGAGGAGTCGAGGTGAGGAGACTAGTAGAAATTATGAAGCCTTGAATAAATCAAGCTCAGAATGTAGGTTTGGTCTGGATATCATCCCTGACGATGTCGTAGGACTAATAGGTGAAAAGCAATTTTGGAAAACAAGAAAAACTATCATCAATCAACAGAGAATCTTCTTCACGCAAGTGTTTGAGTTACATAGACTTATCAAGCAGGTCCAAAGATTAATTGCAGGATCACCTAATCTATTGTTTGAAGACAACCTTCTACTTAACAAACCACCAACGAAAACATCCTCCTCCGAAAAACTACAATCTGACTTTATCGGTGAACAACATTTGACCGTTTTTAAACATGACAGCAAGTTCGACAAAGCCTCTACGTCCGAGGATGTTAAAATCAGTGCAGTTGGGAACATTCCCTTTCCTTGTGTGAACAACATAAGCAAAGAACATAATCGGCTTTCATATTATGGCAATCATCATTTAGGAAATCTTGCATTAGCCTCTGCAGATAAAAATTCAAATTCCATTTCCATTTCCAAACAACCCTCAAGCATTGTATACCCTCCGCCGCCAAACCAATGGTTAGTTCCTGTCATGTCTCCATCTGAAGGTCTTGTATATAAGCCAATCATTGGACCATGCCCTCCAAATGCCGGTGGCATCATGGCACCACTATACGGTGCTTGTGGTGCATTGAGCTTGAATCCAGGAACCAAAGATGTTTTAGAGCCATCTCTTACAAGTTTTCATCAAAAGATTGGAATCCTTTCTGGTTCATCATTACCACAACTGTTACCACCATGCGTTCCTTCTTTCATGCATAGATCTATATCAGCTTCATCTGTTGAACAAATGGGACAATCTAGTGGTCCTAAAAATCATCACTCATATGCCGAACTCAATTCAGCAATATTGTACCAGAGTCCTTCAAACATGTCTACTCAGATAAGCCAAGTAATGTCAAGAAATATTTCAACTTATCAATCATTGGAAGATAATAAAGAATTACAGGCAAGTACAGCCAGTAGTCCATCCAAGAGAATGAAAGGAGATGAACTTCCTTTATTTCCACTGGCTCCGACATTTTGGTCATCGCCAGATCGCGACTCGCATGTTGAACATCAGTCAAAAGTAATCAAAGCTCTTCCTCATAATAAAAAATCAGCAAGTGAATCAGCAGCCAAGATATTCATGTCAATACAAGATGAAAGGAAACTTTTGTAA 2142 0.3875 MKGAIDEGKDISPMFPRLHVKDAEKGGPKAPPRNKMALYEQFSIPSQSIAAGGPGSGSLFSLPLRNCTVPTTSSHLGYNESIKFCSSKSNAISILSEKTQAYNSRKINLTKLTQDNYINSSKSSLKTLDGEDAHITPSSVHVKSSFYGGVVQNEKDEDKLARCNLSFSFKSLNSFGKVMNSSGAIGMNSPQFGKNQMEEHKDVSQIDRKAKEKSPHSLNGFDETTNESSNSSAKYTNSKSMKEEIKSVSVDSLKALQGSNGHRHEDHAAFVDKNNFRDHCMEKPAMSDVQKCSGELEIGRRSLHGKGERSRGEETSRNYEALNKSSSECRFGLDIIPDDVVGLIGEKQFWKTRKTIINQQRIFFTQVFELHRLIKQVQRLIAGSPNLLFEDNLLLNKPPTKTSSSEKLQSDFIGEQHLTVFKHDSKFDKASTSEDVKISAVGNIPFPCVNNISKEHNRLSYYGNHHLGNLALASADKNSNSISISKQPSSIVYPPPPNQWLVPVMSPSEGLVYKPIIGPCPPNAGGIMAPLYGACGALSLNPGTKDVLEPSLTSFHQKIGILSGSSLPQLLPPCVPSFMHRSISASSVEQMGQSSGPKNHHSYAELNSAILYQSPSNMSTQISQVMSRNISTYQSLEDNKELQASTASSPSKRMKGDELPLFPLAPTFWSSPDRDSHVEHQSKVIKALPHNKKSASESAAKIFMSIQDERKLL 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01398 713 MobiDBLite consensus disorder prediction 300 319 - -
Vifa4g01398 713 MobiDBLite consensus disorder prediction 219 238 - -
Vifa4g01398 713 MobiDBLite consensus disorder prediction 186 242 - -
Vifa4g01398 713 MobiDBLite consensus disorder prediction 300 318 - -
Vifa4g01398 713 PANTHER PROTEIN EARLY FLOWERING 3 1 711 IPR039319 GO:2000028
Vifa4g01398 713 MobiDBLite consensus disorder prediction 195 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01398 Vifa-Chr4 416360506 416364695 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01398 K12125 - gmx:100820110 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01398 4 416360506 416364695 Vifa4g01398 4 416360506 416364695 ECH