Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01396 ATGCTTCCTACTAGATTGGAGGAAGGGAAGGACCCTGCTGCAATAGCTACATTAAGAGTGACACACTCTAGGCAATTTCCTTTGAGGCTTTTGCAGTTTTTCTTACTCTTTTTGATAATTGGAATTGGTGGTTCATTTCTTAGCATGTATATGATTAGGCATTTTCGTATTCAGAATGTGGCTTTCGTGCAATCGTCAGTGCGAAAGCCTTGTTTTCAGAGGCCGGCGGTTGTGGAGAATTGGTTTAAGGCTCCTTCTAGTTTGTTGCATAGTATGAATGATGTTGAACTCTTCTGGAGAGCTTCTTTTACACCGAGGATTCAGAGTTATCCGTTTAAAAGAACTCCGAAAATCGCGTTTATGTTCTTGACTAAGGGGCCTTTGCCAATGGCTCCACTTTGGGAGAGGTTCTTTAAGGGACATGAGAAGCTTTACTCAATCTATGTTCATTCGTTGCCGTCTTACAATGCTGATTTTCCACCATCTTCGGTTTTTTATCGCAGACAGATCCCTAGTCAGGTGGCTGAATGGGGAATGATGAGTATGTGTGATGCCGAAAGAAGACTTCTAGCGAATGCATTGCTTGATATCTCAAATGAATGGTTTGTTCTTCTATCCGAGGCCTGCATCCCTCTCCAGAACTTCAGCATCGTACACCGTTACTTGTCACGGTCAAGGTATAGTTTTATGGGTGCATTTGATGAGCTTGGTCCTTATGGAAGAGGACGTTACGAAGAAAACATGAAGCCTGAAATCAACCTGAGTGACTGGCGTAAGGGGTCTCAGTGGTTCGAAATTAACCGCGAACTTGCGGTTAGGATAGTTGAAGACAGTACTTACTATCCAAAACTCAAAGAGTTCTGCGTACCTCACAAATGCTATGTTGATGAACACTATTTCCAGACAATGTTAACCATTAATACTCCTCATCTTCTTGCGAATCGGAGCCTCACTTACGTCGATTGGTCAAGAGGCGGTGCTCACCCGGCTACGTTTGGGAAGAATGACATCAAAGAGGAATTCTTCAAGAAAATTTTGCAGGATCAGACATGTCTTTATAATAACCAGCCAACTTCACTTTGTTTCTTATTTGCTAGAAAATTTGCACCTAATGCTTTAGGTCCTCTGTTAGATTTAGCGCCGAAAATTTTTGGAATAGGAAGTTCGTCTCGCATCTGA 1179 0.4232 MLPTRLEEGKDPAAIATLRVTHSRQFPLRLLQFFLLFLIIGIGGSFLSMYMIRHFRIQNVAFVQSSVRKPCFQRPAVVENWFKAPSSLLHSMNDVELFWRASFTPRIQSYPFKRTPKIAFMFLTKGPLPMAPLWERFFKGHEKLYSIYVHSLPSYNADFPPSSVFYRRQIPSQVAEWGMMSMCDAERRLLANALLDISNEWFVLLSEACIPLQNFSIVHRYLSRSRYSFMGAFDELGPYGRGRYEENMKPEINLSDWRKGSQWFEINRELAVRIVEDSTYYPKLKEFCVPHKCYVDEHYFQTMLTINTPHLLANRSLTYVDWSRGGAHPATFGKNDIKEEFFKKILQDQTCLYNNQPTSLCFLFARKFAPNALGPLLDLAPKIFGIGSSSRI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01396 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 55 377 IPR044174 GO:0016757
Vifa4g01396 392 Pfam Core-2/I-Branching enzyme 118 345 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01396 Vifa-Chr4 416294330 416296547 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01396 - - mtr:25500385 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01396 4 416294330 416296547 Vifa4g01396 4 416294330 416296547 ECH