Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01386 ATGTACGGCGGACCCTCCTCCAAAATGGGCCGCGCCGGCCCCAAACGTCTCACTTCGTCTTTCCCCCCTCCGCCGCATCACCGCCCGCCTTCCTCCTCCAGCTCCCGTCTCTCCCTCGGTGGCTCTGCCCGGAAAACGCCACCGGCGGTGGAGGAGACTTTCAGCCTTGTATCCGGCAGCAATCCACCTGCTTTCTCTATGATCATAAGGCTGGCGCCAGACCTTATCGAAGAGATCAAGCGCGTGGAGGCACAAGGTGGCACTGCAACTATGAAATATGACGCTAATCCAAATAATCCCAATGGAAATATTATCGACGTTGGTGGGAAGGAGTTCAGATTTACATGGTCAAAGGACGGTGATCTATGTGATATTTATGAACAGCGCCAAAGTGGTGTAGATGGAAATGGTTTGCTTGTTGAATCTGGGTGTGCCTGGCGCAAAGTGAATGTACAACGTATCTTGGACGAATCAACTAAGAATCATGTCAAAATGCGGTCAGAGGAAGCCGAACGCAAGCTCAAGTCACGCAAAGCCATTGTCTTGGAGCCTGGGAACCTGTCTACGCAGAGCAATCTAAAGGCGTTGGTAGCTGTTGAGGCTACATCATGGAAAAATTACAGTAAAAAGAAAGAGGCTGCTTTTAAGAAAAAGAAAGCGGAAACTCTTCCAGTTGGAGGTCCCCCAAAAACCTCCAATAGATCTGGATTGATGTCAACAACTACTACTGCCAAGGGAAAACGTTCTTCTCCTCTTCCATCTTCACCTGATCACTTTGCTCCTTCTTCCTCTCCACGGGGAGCTGTTAATATCTCTAAAATTATTGATGATGCCGTGCCATCACAAATGACAGACAAGCAAGATACTAATGCCGTCTTTGAGAAAGAAGTCCCTACCAGGACAAGCAATGCTATTAGGGCCAAACCAGGAGGCAAAGGAAATAATGGATCCAACCCAATAGATTTGCAGAGCATGTTAATTTCTCTCCTAAAGGATAAACCTAACGGAATGACTTTTAAGGCCTTGGAGAAAGCAGTCAGTGACACACTTCCAAGTTCCTTAAGGGATCTTGAGCCAATTCTAAAAAAAATTGCAAAATACCAGTCCCCTGGACGATATATTTTAAAGCCAGCGGTGGATCCAGAAAGCTTCAAGAAACCTCCGACTGAAAGGGGAAGTTCGCCGGTAGAAAATCATAACCAAACACCCGCCCATGAAGAGTTTCATAATCAGATATCAGCTCCACAGGGAGATTTCGAGGAGAAAGTTCCAAATGATGATTTGGAGGAAACAATACAAGGAAAGTCCAAAGTGGAAGAAGAATCAAGCACATTGGAAAAAATTGATATGCAACATGCTTCACCTGATTTATTTGGTGACAAAAAAGGTTCTGATTATAGTGAAGGGAGGGCAGGCAGCTCCAGTGCTAGTGGAAGTGATAGTGATAGTGAAAGTAACAGTAGTGACAGTGGAAGCGACAGTAGGAGCAAAAGTAAAAGTCCTGCTGGATCAGGGAGTGGGAGTAGCAGTGACAGTGAAAGTGATGCATCTTCCAGCAGCAAGGAGGGGTTGGAGGGTTCTGATGAGGATGTAGATATTATGAGTGATGATGAAAAAGAGCCAAATCTCAAAGCGGAAACCTACGATCAAAAGATTTCTTTACCCATTCCAGAAAAATCTCCTGATGGAAGATCTATGCAGAATGAGTTTGATGAGAAGCAAGATGGTAATGAATTTGATGCCGTTGATATTGAAAAAGTGTCGCCAGAGGAACAGGGAGCTAAAATGGGGTTAACTACAAATAGTATTTCTGATAGAGTTGGCAAATATGCAGAAGAGGTAGAGCCTTTTTCACCTGATTATCAACAGCTACAGGAGCGCAAAAATTATATAGGGAGTTTGTTTGATGAAAAGGAAAGTGAAGTCAAAGATAGCTCTAGGAACGAACATTCTGACAGCTCTGATAAGCTATCTAAAGATACACATAAGAGGGGTTCTGAATTGAAGAACATCGATGAGAAATTCGAAGGTACAAAGAATTTGAAAGCAAGAAACTCGTCTCGTGAGTCATATTCTCCGGGTACAGATGTGCAAAAATTTGGAAACTCTAGAAATTTTTCTCCTTTCGAATTTACTGAAGACGCCGGTAAAGGCCCTAATACACAAATGGGGAATAGAGCTGACAGACAAGGAAACTCCAATCTTGGTTTCCAGAAAGGATACAATCGTGCATTGCCTGGAAATTCTAATTCAGATTTACCGCAGACAAGTCAAAGGTCCTTTGACCAAAGCCCTCTAGGAAACCCTTCCTATCCATTGGAAAAATCAGACAAACTCGGTGGAAGCACAGGGCACAACAGAAAACACTCAGGAAAGGACTCCCGTGCACGTGAAGCTTCTCATGTGCAGGAAAATAAATCGCATAGAGATGCTCAAAATGAAGATATTTATGCCTCTGGGAAAAAAGTCCCCAGGAGTTCCTGGGTTGATAGTAATGGGAGTAAGCAGTCACTATTACCCATGGATTCTAATTACCAAAAACAAAGTGAAATGGTTGGTAAGTTAAAGGAAGGCCGACAAGGTACACAGTTACATTTGGGAACCTCACCTAAGGATAACTACAGAACTGGTCTTAATAAATCCCCTGCTGTTAATGGGCGAGGTATCTCGCTTCAAAGAGAGCATTCAGACCTGGAGTTGGGAGAACTTCGTGAGTCCACTCCTGATGAAACCATTGTTCCAAAGGAATTTGAGCGAAGAGGTTCTTTTAAACATATGGAAAACAGATCAAACACTTTAGAGGGCCTGAATTCAAATGTCACTAAAGTAAAACCTTCATTGAAAACAACTCTAGATTCCGGAAAGCCATCATCGGTGTTTGCAAGTTCAGGTTTTCCTAGCAATTTGGAAAACACAAATAAAAAGAATGCAGATTATCATTTTGAAGATTCAACAAAGTCTCATTCTAAAGTTATGCAAACTCATTCACAACATTTGAAAGCAGATAATGCGGACATTGGATCTCAAAACAAACAGTTAGATATGAGTACCAAATTAAGAAATAACGAGTCCGGCGTAAGCCATGATATTGATTTGGACGGTCGCAGTGAAAGCAATAGAAGAGCGCCTGCAAATGGGTCAAAGCAAGAGACGAAACGTGGAATGATTTCCTATCCTCTGAAAGAGAGTAAAAGACAAACACCTAATTCATTTGAAGAGGTGGCCGATGGAAGAAAGGATCCAATATTTGCAGATAGAAATAATAGTGACCAAAAGAAGAGAGAATCTTCCTCCGATGAAAATAGCTGCTCTTATTCAAAGTATGACAAGGAGGAACCTGAATTAAAGGGAGCCATAACGACATTCTCCCAATACAAAGAATATGTGCAGGAATACCAAGATAAATATGAAAGTTACCTCTCCTTGAACAAGATTTTGGAGGATTACAAGATTGAGTTTCAGAAATTTGGTGATGATTTAGAATATGCTAAAAGCAGGGGAGATATGGATGGATATGACAACATTGCAGAACAGATTAAGGAATCCTATAGGCAATGCGGATCTAGACACAAGAGACTGAAGAGAATATTTATTGTGCTTCATGAAGAACTGGCGAATATTAAACAAAGGATCAAAGACTTTGCTGAGTCATATAGAGACTGA 3663 0.4226 MYGGPSSKMGRAGPKRLTSSFPPPPHHRPPSSSSSRLSLGGSARKTPPAVEETFSLVSGSNPPAFSMIIRLAPDLIEEIKRVEAQGGTATMKYDANPNNPNGNIIDVGGKEFRFTWSKDGDLCDIYEQRQSGVDGNGLLVESGCAWRKVNVQRILDESTKNHVKMRSEEAERKLKSRKAIVLEPGNLSTQSNLKALVAVEATSWKNYSKKKEAAFKKKKAETLPVGGPPKTSNRSGLMSTTTTAKGKRSSPLPSSPDHFAPSSSPRGAVNISKIIDDAVPSQMTDKQDTNAVFEKEVPTRTSNAIRAKPGGKGNNGSNPIDLQSMLISLLKDKPNGMTFKALEKAVSDTLPSSLRDLEPILKKIAKYQSPGRYILKPAVDPESFKKPPTERGSSPVENHNQTPAHEEFHNQISAPQGDFEEKVPNDDLEETIQGKSKVEEESSTLEKIDMQHASPDLFGDKKGSDYSEGRAGSSSASGSDSDSESNSSDSGSDSRSKSKSPAGSGSGSSSDSESDASSSSKEGLEGSDEDVDIMSDDEKEPNLKAETYDQKISLPIPEKSPDGRSMQNEFDEKQDGNEFDAVDIEKVSPEEQGAKMGLTTNSISDRVGKYAEEVEPFSPDYQQLQERKNYIGSLFDEKESEVKDSSRNEHSDSSDKLSKDTHKRGSELKNIDEKFEGTKNLKARNSSRESYSPGTDVQKFGNSRNFSPFEFTEDAGKGPNTQMGNRADRQGNSNLGFQKGYNRALPGNSNSDLPQTSQRSFDQSPLGNPSYPLEKSDKLGGSTGHNRKHSGKDSRAREASHVQENKSHRDAQNEDIYASGKKVPRSSWVDSNGSKQSLLPMDSNYQKQSEMVGKLKEGRQGTQLHLGTSPKDNYRTGLNKSPAVNGRGISLQREHSDLELGELRESTPDETIVPKEFERRGSFKHMENRSNTLEGLNSNVTKVKPSLKTTLDSGKPSSVFASSGFPSNLENTNKKNADYHFEDSTKSHSKVMQTHSQHLKADNADIGSQNKQLDMSTKLRNNESGVSHDIDLDGRSESNRRAPANGSKQETKRGMISYPLKESKRQTPNSFEEVADGRKDPIFADRNNSDQKKRESSSDENSCSYSKYDKEEPELKGAITTFSQYKEYVQEYQDKYESYLSLNKILEDYKIEFQKFGDDLEYAKSRGDMDGYDNIAEQIKESYRQCGSRHKRLKRIFIVLHEELANIKQRIKDFAESYRD 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 723 770 - -
Vifa4g01386 1220 Gene3D - 1120 1218 - -
Vifa4g01386 1220 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1110 1219 IPR010844 -
Vifa4g01386 1220 Pfam Occludin homology domain 1117 1215 IPR010844 -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 684 709 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 1066 1108 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 215 267 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 378 582 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 825 850 - -
Vifa4g01386 1220 SUPERFAMILY occludin/ELL-like 1118 1216 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 420 467 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 975 989 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 631 683 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 564 582 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 1 47 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 949 1108 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 468 521 - -
Vifa4g01386 1220 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 8 1219 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 862 886 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 393 409 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 1024 1038 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 228 267 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 990 1023 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 614 887 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 949 974 - -
Vifa4g01386 1220 MobiDBLite consensus disorder prediction 780 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01386 Vifa-Chr4 415377327 415385705 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01386 - - psat:127076426 2096.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01386 4 415377327 415385705 Vifa4g01386 4 415377327 415385705 ECH