Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01376 ATGTCTAATATTGTTATAGTTTTTGATTTTGACAAAACTATCATTGATTGTGATAGTGATAATTGGGTTATCGATGAATTAGGTTTCACCGATTCGTTCAATCACATTCTTCCCACAATGCCTTGGAACTCAGTCATGGACATGATGATGATGGAGCTTCATTCACATGGCATTACCATTGAAGAGATTGAAAAGGTTCTTCATAGGATCCCAATTCATCACAGAATAATACCTGCTATTAAATCCGCACATGCTTCCGGATGTGATTTAAGGATTGTGAGTGATGCAAATATGTTCTTCATTGAAACTATTTTGAAGAATTTGGGAATAAGTGAATGCTTCACAGAGATTAACACTAATCCAGGTTATGTTAATCAAAAAGGAAGATTAACAATTTTGCCATATCATGATTTCAACAAGGCCTCACATGGTTGTCCTAATCCCTGCCCTCCAAACATGTGCAAGGGTTTAGTCATTGATAGAATTCAAAACACAATTAGTGGAGTGGATAACAAGAGGTTCATCTACCTTGGTGATGGTGCTGGTGATTACTGTCCTAGCTTGAGATTTAGAGACATGGACTTTGTGATGCCTAGGAAGAATTTTCCAGTTTGGGATTTGATATGCAAAGATCCTTCACTTGTTAAGGCTGAAATTCATGCTTGGACTGATGGACAAGAGCTTGAACAAGTTTTGATGAAGTTGATCAATAACATTATGATTGAAGAAAATGCTAAATTCATTTCAAGTGATTGCAAGCTACAATCTCTTTCAACTCCTGTGTTTGAAACCTTGCCTAAACCTCTATCAGTTAGACCATAG 822 0.365 MSNIVIVFDFDKTIIDCDSDNWVIDELGFTDSFNHILPTMPWNSVMDMMMMELHSHGITIEEIEKVLHRIPIHHRIIPAIKSAHASGCDLRIVSDANMFFIETILKNLGISECFTEINTNPGYVNQKGRLTILPYHDFNKASHGCPNPCPPNMCKGLVIDRIQNTISGVDNKRFIYLGDGAGDYCPSLRFRDMDFVMPRKNFPVWDLICKDPSLVKAEIHAWTDGQELEQVLMKLINNIMIEENAKFISSDCKLQSLSTPVFETLPKPLSVRP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01376 273 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Vifa4g01376 273 SUPERFAMILY HAD-like 4 195 IPR036412 -
Vifa4g01376 273 NCBIfam MtnX-like HAD-IB family phosphatase 3 200 IPR006384 GO:0016791
Vifa4g01376 273 Gene3D - 1 199 IPR023214 -
Vifa4g01376 273 NCBIfam HAD-IB family phosphatase 5 187 - -
Vifa4g01376 273 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
Vifa4g01376 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 244 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01376 Vifa-Chr4 413049204 413050499 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01376 K13248 - gmx:100785878 432.18