Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa4g01337 | ATGGCAAGGATCTCCAAACTTGAAACAACAAACACACACTGCATCTTCCTTCTCCTCTCCCTGGACATGGCATCCAACGGCTTGTGTCCTTCGATTAAAAACATTCTTCTTTTAGATTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCAACAAACAGTTCAAAATTAGCTTTTGAGAAGTTTGTGTTTACTAAGACTGTTAAGACAAATGCGCGGACTGAAGCTGAGATAACACTGCTTGAGAACAATATCATTGTTTACAAATTTGTGCAAGACCTGCATTTCTTTGTCACTGGCGGTGATGATGAAAATGAGCTCATTTTGGCATCAGTTCTTCAGGGTTTCTTTGATGCAGTCACCCTTTTGCTGAGGAGCAATGTTGACAAAGGTGAGGCACTTGAGAACTTGGATCTCATTCTTTTATGTCTTGACGAGATAGTTGATGGAGGGATTATTCTTGAAACAAATGGACCTCTTATAGCTGAAAAAGTGACCTCCCATAACATGGATGCTGATGCCCCCTTATCAGAGCAGACACTAACTCAGGCATGGGCTACAGCCAGAGACACTTTCACAAGAACTCTTCTAACATGA | 609 | 0.4204 | MARISKLETTNTHCIFLLLSLDMASNGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKTVKTNARTEAEITLLENNIIVYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKGEALENLDLILLCLDEIVDGGIILETNGPLIAEKVTSHNMDADAPLSEQTLTQAWATARDTFTRTLLT | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa4g01337 | 202 | Gene3D | - | 24 | 172 | - | - | |
| Vifa4g01337 | 202 | PANTHER | ZETA-COAT PROTEIN | 28 | 201 | IPR039652 | GO:0006890|GO:0030126 | |
| Vifa4g01337 | 202 | SUPERFAMILY | SNARE-like | 32 | 172 | IPR011012 | - | |
| Vifa4g01337 | 202 | Pfam | Clathrin adaptor complex small chain | 32 | 173 | IPR022775 | - | |
| Vifa4g01337 | 202 | FunFam | Coatomer subunit zeta-2 | 26 | 172 | - | - | |
| Vifa4g01337 | 202 | CDD | Zeta-COP | 33 | 168 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa4g01337 | Vifa-Chr4 | 397032999 | 397036445 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa4g01337 | K20472 | - | gmx:100775726 | 319.701 |