Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01303 ATGAGTATGAATATTCATCAAGAGAATCCTCAGAACTCTAGTGTTAAGAAGTTCTTTGAGCGTGCAGCAAAGTGGTTTGAATTCGGAGATAGAGAAAGAAGGATAAAAGATATGAAAACTAGCATGGGTATAGCAGTTTCTATAATCGCAACTATAACATTTTCACTCGCCACTAATCCACCCGGTGGCGTCGTGCAAGCAGGTGTGAAGGATATTCACGTTTCCATAAACGATACATTTTGTTCGTATACGACCGGAGGTGTTATATGCGTTGGAGAATCTATCTTGGCTACTTCAAAAAGTGGTGATTATCTAGCATTTTTGATAAGCAATACAACTTGTTTCATTTCATCACTGAGTGTTCTTCTCTTGCTTGTTAGTGGAATTCCTATAACAAAAACATTTATATTATGGCTTTTATCAGTTGGAATGTGTGTCATACTCACAACCTTTGCTCTTACCTACATGTTTGCTGTTTTTATGGTCACACCAGACGTCATTTGGCAATCTCACTTCGGTGTGTTAGGTATTGCTATTATTGTTTGGGTATCGCTTGTTGGAATTCTTGCTTTTATTTTAACTCTGCGTCTTATTGTAAGGGGTGTCAATAAAGTTTACAACTTCATGGAGTGTCAAGAAACTTCGCAATGA 651 0.3748 MSMNIHQENPQNSSVKKFFERAAKWFEFGDRERRIKDMKTSMGIAVSIIATITFSLATNPPGGVVQAGVKDIHVSINDTFCSYTTGGVICVGESILATSKSGDYLAFLISNTTCFISSLSVLLLLVSGIPITKTFILWLLSVGMCVILTTFALTYMFAVFMVTPDVIWQSHFGVLGIAIIVWVSLVGILAFILTLRLIVRGVNKVYNFMECQETSQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01303 216 PANTHER CASKIN 16 197 - -
Vifa4g01303 216 Pfam Domain of unknown function 34 161 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01303 Vifa-Chr4 389647303 389647953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01303 6 166 Miscellaneous Gene Families AT1G34050 25.294 2.74e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01303 - - psat:127076322 271.552