Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01302 ATGAATATTCATCAAGAGAATCCTCAGAGCTCTGGTGTTAAGAGGTTCTTTGAGCGTGCAGCAAGGTGGTTTGAATTCGGAGATAGAGAAAGAAGGATAAAAGATATGAAAACTAGCATGGGTATAGCAGTTTCTATAATCGCAACTATAACATTTTCACTCGCCACTAATCCACCCGGTGGCGTCGTGCAAGCAGGTGTGAAGGATATTCCCGTTTCCATAAACGATACATTTTGTTCGTATACGACCGGAGGTGTTATATGCGTTGGAGAATCTATCTTGGCTACTTCAAAAAGTGGTGATTATCTAGCATTTTTGATAAGCAATACAATTTGTTTCATTTCATCACTGAGTGTTCTTCTCTTGCTTGTTAGTGGAATTCCTATAACAAAAACATTTATATTATGGCTTTTATCAGTTGGAATGTGTGTCATACTCACAACCTTTGCTCTTACCTACATGTTTGCTGTTTTTATGGTCACACCAGACGTCATTTGGCAATCTCACTTCGGTGTGTTAGGTATTGCTATTATTGTTTGGGTATCGCTTGTTGGAATTCTTGCTTTTATTTTAACTCTGCGTCTTATTGTAAGGGGTGTCAATAAAGTTTACAACTTCATGGAGTGTCAAGAAACTTCGCAATGA 645 0.3814 MNIHQENPQSSGVKRFFERAARWFEFGDRERRIKDMKTSMGIAVSIIATITFSLATNPPGGVVQAGVKDIPVSINDTFCSYTTGGVICVGESILATSKSGDYLAFLISNTICFISSLSVLLLLVSGIPITKTFILWLLSVGMCVILTTFALTYMFAVFMVTPDVIWQSHFGVLGIAIIVWVSLVGILAFILTLRLIVRGVNKVYNFMECQETSQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01302 214 PANTHER CASKIN 22 195 - -
Vifa4g01302 214 Pfam Domain of unknown function 32 159 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01302 Vifa-Chr4 389613562 389614206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01302 4 164 Miscellaneous Gene Families AT1G34050 25.882 4.78e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01302 - - psat:127076322 263.462