Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01284 ATGGTCCCTGTTTCCAGAACCGAAGGTGGCACTGGTACCCACTTGCTGTCTGCTAAAGTTCGGAAAACTATTCAATCCATTAAGGAAATCGTTGGGAATCATTCTGAGGCTGATATCTATGTTGCCCTTAAAGAGACTAACATGGATCCTAATGAAACGACGCAGAAATTGCTTAACCAAGATCCATTCCATGAGGTGAAGAGAAGGAGAGATCGAAAGAAAGAGAATCAAAATGTTGAGAACAGGGGTTCGGGTGGTCAACCAAGGAGGCATTCTGACAATGGTGGCCAACGAGCTCAATTCCACAGCCATTTGGAACATAGTGTTGGGAATAGGGGTTCGGGTGAACCTGAGAGGCGTTCTGATAATGGTGGTCAAAGAGCCCAATTCCATAACCAGGCTGAACGTATTGTTGGGAATAGGGGTTCCGGTGAATCAGAGAGGCAATCTGACAATGGTGGTGAAAAAGCCCAGTTCCGCAACCATTTGGAACATAATGTAGGGAATAAGGGTTCGGGTGAACCGGAGAGGCAATCTAACAGTGGTGTTCAAAGAGCCCAATTCCACAACCGTTTGGAACATGATGTTGGGAATAGGGGGTCGGGTGAACCCGAGAGGCGTTCTGATAATGGTGGTCAAAGAGCCCAATTCCACAATCATTCGGAACATAATGCTGGGAACAGGGGTCAGCCAAGGAGGCATTCTGAAAATGGTGCTCAAGGAGGAGTGCAATTCAACAACCCTGCTGAACATATTGTTAGGAACAGAGAGTCTGGTGAACCAAAGAGGCATTCTGAGAATGGTAGTCAAGGAGTGCAACTCAACAACCCTTCGGAACAACATAATCTTGACAGCAAGGGTTCTGGTGAACCAAGAAGGCACCCTGAAAATGGCAGTCAAGGAACGCATGCCCATGAACATAGAGTTCGAAGGACAAACTATTCTCGAAATCCTTTACCAAGCTTCAGCAGAGAGTTCCGTGTAGTCAGAGACAACCGGGTAAACCCTATTCATAAAGATAAAGAAGTAAAGCCTCCTTCACAACACCACTCAACACCCACTGCTGAGAAATCACCTGGAAACACTTCTGACAAGGGCTTGTCAGCAGCTTCTATTAGTCAAGGGCCCTCTGGTGCTAGAAATCATCAGGCTCTAAATGGTCCTTCTGATTCACATGCTAGGCAGTCAAAAGATGCCGCTAGTGCTACTAATGTCAGTGACAAAAAAATTACACCGGAGAACATTCAAGGCGCGGTGACGAATGCATCAGCACGGGCGCAACCAATTAAGCCTAACAACATCCATCAGAATTCTTCAGCAACGGCTTCAAGCAGTTCTGTAGTTGGAGTATATTCCTCTTCTACTGATCCAGTTCATGTGCCCTCCCCCGATTCCAGATCATCGGGAGCAATTAGGCGTGAAGTTGGGGTTGTTGGTGTTCGAAGACAGTCTTCTGATCACAAAGGGAAACAGTTGTTTCCTCCTAGTAGTTCTCATGCTAATAATTCTATTGTTGGAAAAGATGCTACTGGTACATCTTCAGATTCGTTTCAATCCGCTGGCGCTGTCCAAAAGACTGAACATATTAGTCAACCTGCTGTAACTGAGCCCTCATTCCCTGGCATGTCTGTTAGCAGACCATCCTTGAACAATCAGCATAATAGTAGGCCACATCAACAAGTTGTGGGACATCAAAGAGTCTCCCATTCCCAGCATAATAAAGAGTGGAAGCCTAAATCAAGCCAGAAGACAAACAACGGTCCTGGAGTGATTGGAACGCCCAAAAAAACAATTTCACCTCCAGCCGAAAAGTCTAAAGTTATGGAATCAGATACAACACAACTTCAGGATTCACTTTCTCAATTGAATGTATACGAGAATCAAAATGTGATCATAGCACACCATATTCGCGTTCCAGAGACTGATCGCCGCCGGCTGACCTTTGGTACCATTGGGGTTGCAACAGAATTTGATTCTTTGACGCATCAACCTCAGTTTCAATTAATAGGAGCCACTGAAACGGCAAGTGGAGAACCGACTATAAGCTTAACTACACCCGCGTCAGAGTCATCCGCTGATGATGTTTCTGGGAGCAATCAGGTGAATTTACGGGATGACCATGGCAAAAATTCCGAATCCGAATCACCAGCCTCCGGTGTTGCTTCTGAGCAACAGTTGCCCGATAACAAAGAATCCTCAAGCTCTCAGAATCTAGACAACTATGCCAATGCTGGATTGGTACGCGATACAAGTCCGTCGTATGCACCGTCACAGTCACAACAGCAAGATTCTCACGATATGCCTGGCTTTTCAGCTTACGACCCGCCCACTGGTTACGATATTCCTTATTTTAGACCTAACATGGATGAAACTGTACGCTCACAGGTTCTTTCACCACACCAAGAGGTTTTGAACTCCCATGCTGCAAACAATGTTCCTGCATCCACAATTGCCATGGTGCAACAACAACAGCAACAACAACATCAAGTTGCACAGATGTATCCACAAGTTCATCTTTCACATTATGCTAATCTCATGCCATATCGTCAGTTTCTATCTCCAGTCTACGTACCACCCATGGCTGTGCCGGGATACTCAAACAATGCTCCTTATCCTCATCCTACAAACGGAAACTATGTATTGATGCCTGGAGGCGGCTCCCATCTTAATGCCAATAACCTTAAATACGGAGTTCAACAGTTCAAGCCCGTTCCTGCTGGAAATCCTTCAGGGTTTGGAAACTTTGCTAGCCCAGCTGGGTATGCCATGTTAGCTCCAGGCGTGGTTGGTGGTGCCTCGGGTCTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTCTACGTCCCAAATCCTCAGGGCGAGACATCTGAAATATGGTTACAGAATCCGAGGGATCTTTCAGGCATGCAATCTACTCAATACTATAACATGCCGGGACAATCACCACATGCGGCACCATTCATGCCATCACACACCGGTCATGCTAACTTCAATGCAGCTGCAGCTCAGTCATCTCACATGCAGTTCCCTGGCATGTATCATACACCTCCACAACAAGCTGCTATGGCGAATCCTCATCATTTAGGACCAGCAATGGGAAACAATGTTGGGGTGGCTGCAGCTGCTCCTGGAGGAGCACAGGTTGGTGCATATCAGCAACCTCAATTGGGTCATCTCAACTGGACAACAAATTTCTAA 3201 0.462 MVPVSRTEGGTGTHLLSAKVRKTIQSIKEIVGNHSEADIYVALKETNMDPNETTQKLLNQDPFHEVKRRRDRKKENQNVENRGSGGQPRRHSDNGGQRAQFHSHLEHSVGNRGSGEPERRSDNGGQRAQFHNQAERIVGNRGSGESERQSDNGGEKAQFRNHLEHNVGNKGSGEPERQSNSGVQRAQFHNRLEHDVGNRGSGEPERRSDNGGQRAQFHNHSEHNAGNRGQPRRHSENGAQGGVQFNNPAEHIVRNRESGEPKRHSENGSQGVQLNNPSEQHNLDSKGSGEPRRHPENGSQGTHAHEHRVRRTNYSRNPLPSFSREFRVVRDNRVNPIHKDKEVKPPSQHHSTPTAEKSPGNTSDKGLSAASISQGPSGARNHQALNGPSDSHARQSKDAASATNVSDKKITPENIQGAVTNASARAQPIKPNNIHQNSSATASSSSVVGVYSSSTDPVHVPSPDSRSSGAIRREVGVVGVRRQSSDHKGKQLFPPSSSHANNSIVGKDATGTSSDSFQSAGAVQKTEHISQPAVTEPSFPGMSVSRPSLNNQHNSRPHQQVVGHQRVSHSQHNKEWKPKSSQKTNNGPGVIGTPKKTISPPAEKSKVMESDTTQLQDSLSQLNVYENQNVIIAHHIRVPETDRRRLTFGTIGVATEFDSLTHQPQFQLIGATETASGEPTISLTTPASESSADDVSGSNQVNLRDDHGKNSESESPASGVASEQQLPDNKESSSSQNLDNYANAGLVRDTSPSYAPSQSQQQDSHDMPGFSAYDPPTGYDIPYFRPNMDETVRSQVLSPHQEVLNSHAANNVPASTIAMVQQQQQQQHQVAQMYPQVHLSHYANLMPYRQFLSPVYVPPMAVPGYSNNAPYPHPTNGNYVLMPGGGSHLNANNLKYGVQQFKPVPAGNPSGFGNFASPAGYAMLAPGVVGGASGLEDSSRVKYKDNLYVPNPQGETSEIWLQNPRDLSGMQSTQYYNMPGQSPHAAPFMPSHTGHANFNAAAAQSSHMQFPGMYHTPPQQAAMANPHHLGPAMGNNVGVAAAAPGGAQVGAYQQPQLGHLNWTTNF 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 109 125 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 673 778 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 285 313 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 673 704 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 61 79 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 265 284 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 449 604 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 348 413 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 189 213 - -
Vifa4g01284 1066 Pfam GBF-interacting protein 1 N-terminal 18 75 IPR009719 -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 80 101 - -
Vifa4g01284 1066 SUPERFAMILY UBA-like 18 78 IPR009060 GO:0005515
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 489 567 - -
Vifa4g01284 1066 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 212 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 51 160 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 713 767 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 189 413 - -
Vifa4g01284 1066 MobiDBLite consensus disorder prediction 326 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01284 Vifa-Chr4 386310805 386316876 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01284 - - psat:127076304 1871.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01284 4 386310805 386316876 Vifa4g01284 4 386310805 386316876 ECH