Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01277 ATGAGTTTTCTGTTTGGCAGTAGAAAGACTCCTGCTGAGCTTTTGAGGGAAAATAAAAGGATGCTAGATAAGTCTATTAGAGAAATTGAAAGAGAAAGACAAGGCTTGCAGTCTCAAGAAAAGAAATTGATTGCAGAGATTAAGAAGAGTGCCAAACAAGGACAAATGGGTGCTGTGAGGGTTATGGCCAAGGATCTTATTAGAACTCGCCATCAGATTGAAAAGTTCTACAAGCTTAAATCACAACTTCAGGGTGTTTCTTTGAGAATTCAGACTCTTAAATCTACTCAAGCGATGGGGGAAGCTATGAAAGGAGTGACGAAAGCAATGGGTCAAATGAATAGGCAGATGAACATGCCTTCATTACAGAAGATAATGCAAGAGTTTGAAATGCAGAATGAGAAGATGGAACTAGTTTCTGAGGTGATGGGAGATGCAATTGATGATGCTTTAGAAGGCGATGAAGAAGAGGAAGAGACAGATGATCTTGTGAATCAGGTTCTTGATGAGATTGGAATCGATATCAACTCTGAGCTTGTGAATACACCTGCATCAACCTCAATCGCCGCACCAGCCGCAAAGAACAGGGTTGCTCAGGCTGAACCAACAGGAAACGACGATGGTGGAATAGATGACGATCTACAAGCTAGGTTAGATAACCTGAGAAAAATGTGA 675 0.4119 MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIAEIKKSAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNMPSLQKIMQEFEMQNEKMELVSEVMGDAIDDALEGDEEEEETDDLVNQVLDEIGIDINSELVNTPASTSIAAPAAKNRVAQAEPTGNDDGGIDDDLQARLDNLRKM 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01277 224 Gene3D - 6 180 - -
Vifa4g01277 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 222 IPR005024 GO:0007034
Vifa4g01277 224 Coils Coil 12 46 - -
Vifa4g01277 224 MobiDBLite consensus disorder prediction 190 213 - -
Vifa4g01277 224 Pfam Snf7 17 184 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01277 Vifa-Chr4 385068878 385070697 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01277 K12191 - atri:130814838 363.229